Recent advances in predicting protein–protein interactions with the aid of artificial intelligence algorithms

S Li, S Wu, L Wang, F Li, H Jiang, F Bai - Current Opinion in Structural …, 2022 - Elsevier
Protein–protein interactions (PPIs) are essential in the regulation of biological functions and
cell events, therefore understanding PPIs have become a key issue to understanding the …

Protein‐protein interaction networks as miners of biological discovery

S Wang, R Wu, J Lu, Y Jiang, T Huang, YD Cai - Proteomics, 2022 - Wiley Online Library
Protein‐protein interactions (PPIs) form the basis of a myriad of biological pathways and
mechanism, such as the formation of protein complexes or the components of signaling …

SDNN-PPI: self-attention with deep neural network effect on protein-protein interaction prediction

X Li, P Han, G Wang, W Chen, S Wang, T Song - BMC genomics, 2022 - Springer
Abstract Background Protein-protein interactions (PPIs) dominate intracellular molecules to
perform a series of tasks such as transcriptional regulation, information transduction, and …

MARPPI: boosting prediction of protein–protein interactions with multi-scale architecture residual network

X Li, P Han, W Chen, C Gao, S Wang… - Briefings in …, 2023 - academic.oup.com
Protein–protein interactions (PPIs) are a major component of the cellular biochemical
reaction network. Rich sequence information and machine learning techniques reduce the …

Prediction of protein-protein interaction sites through eXtreme gradient boosting with kernel principal component analysis

X Wang, Y Zhang, B Yu, A Salhi, R Chen… - Computers in biology …, 2021 - Elsevier
Predicting protein-protein interaction sites (PPI sites) can provide important clues for
understanding biological activity. Using machine learning to predict PPI sites can mitigate …

Learning-based robotic grasping: A review

Z Xie, X Liang, C Roberto - Frontiers in Robotics and AI, 2023 - frontiersin.org
As personalization technology increasingly orchestrates individualized shopping or
marketing experiences in industries such as logistics, fast-moving consumer goods, and …

Benchmark evaluation of protein–protein interaction prediction algorithms

B Dunham, MK Ganapathiraju - Molecules, 2021 - mdpi.com
Protein–protein interactions (PPIs) perform various functions and regulate processes
throughout cells. Knowledge of the full network of PPIs is vital to biomedical research, but …

[HTML][HTML] MM-StackEns: A new deep multimodal stacked generalization approach for protein–protein interaction prediction

AI Albu, MI Bocicor, G Czibula - Computers in Biology and Medicine, 2023 - Elsevier
Accurate in-silico identification of protein–protein interactions (PPIs) is a long-standing
problem in biology, with important implications in protein function prediction and drug …

RPI-MDLStack: Predicting RNA–protein interactions through deep learning with stacking strategy and LASSO

B Yu, X Wang, Y Zhang, H Gao, Y Wang, Y Liu… - Applied Soft …, 2022 - Elsevier
RNA–protein interactions (RPI) play a crucial role in foundational cellular physiological
processes. Traditional methods to predict RPI are implemented through expensive and labor …

Integrated modelling for mapping spatial sources of dust in central Asia-An important dust source in the global atmospheric system

H Gholami, A Mohammadifar, H Malakooti… - Atmospheric Pollution …, 2021 - Elsevier
Spatial mapping of dust sources in arid and semi-arid regions is necessary to mitigate on-
site and off-site impacts. In this study, we apply a novel integrated modelling approach …