Confluence, synnovation, and depauperons in plant diversification
MJ Donoghue, MJ Sanderson - New Phytologist, 2015 - Wiley Online Library
We review the empirical phylogenetic literature on plant diversification, highlighting
challenges in separating the effects of speciation and extinction, in specifying diversification …
challenges in separating the effects of speciation and extinction, in specifying diversification …
Evolutionary consequences, constraints and potential of polyploidy in plants
H Weiss-Schneeweiss, K Emadzade, TS Jang… - … and genome research, 2013 - karger.com
Polyploidy, the possession of more than 2 complete genomes, is a major force in plant
evolution known to affect the genetic and genomic constitution and the phenotype of an …
evolution known to affect the genetic and genomic constitution and the phenotype of an …
Polyploidy: pitfalls and paths to a paradigm
Investigators have long searched for a polyploidy paradigm—rules or principles that might
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …
The polyploidy revolution then… and now: Stebbins revisited
Polyploidy has long been considered a major force in plant evolution. G. Ledyard Stebbins,
Jr., an architect of the Modern Synthesis, elegantly addressed a broad range of topics, from …
Jr., an architect of the Modern Synthesis, elegantly addressed a broad range of topics, from …
Multiple polyploidization events across Asteraceae with two nested events in the early history revealed by nuclear phylogenomics
CH Huang, C Zhang, M Liu, Y Hu, T Gao… - … Biology and Evolution, 2016 - academic.oup.com
Biodiversity results from multiple evolutionary mechanisms, including genetic variation and
natural selection. Whole-genome duplications (WGDs), or polyploidizations, provide …
natural selection. Whole-genome duplications (WGDs), or polyploidizations, provide …
Detecting alternatively spliced transcript isoforms from single‐molecule long‐read sequences without a reference genome
Alternative splicing (AS) is a major source of transcript and proteome diversity, but
examining AS in species without well‐annotated reference genomes remains difficult …
examining AS in species without well‐annotated reference genomes remains difficult …
Natural pathways to polyploidy in plants and consequences for genome reorganization
A Tayalé, C Parisod - Cytogenetic and genome research, 2013 - karger.com
The last decade highlighted polyploidy as a rampant evolutionary process that triggers
drastic genome reorganization, but much remains to be understood about their causes and …
drastic genome reorganization, but much remains to be understood about their causes and …
Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus
Allopolyploidisation merges evolutionarily distinct parental genomes (subgenomes) into a
single nucleus. A frequent observation is that one subgenome is 'dominant'over the other …
single nucleus. A frequent observation is that one subgenome is 'dominant'over the other …
Genomic Insights into Genetic Diploidization in the Homosporous Fern Adiantum nelumboides
Y Zhong, Y Liu, W Wu, J Chen, C Sun… - Genome biology and …, 2022 - academic.oup.com
Whole-genome duplication has been recognized as a major process in speciation of land
plants, especially in ferns. Whereas genome downsizing contributes greatly to the post …
plants, especially in ferns. Whereas genome downsizing contributes greatly to the post …
Genome-wide disruption of gene expression in allopolyploids but not hybrids of rice subspecies
Hybridization and polyploidization are prominent processes in plant evolution. Hybrids and
allopolyploids typically exhibit radically altered gene expression patterns relative to their …
allopolyploids typically exhibit radically altered gene expression patterns relative to their …