Association genetics in crop improvement

JA Rafalski - Current opinion in plant biology, 2010 - Elsevier
Increased availability of high throughput genotyping technology together with advances in
DNA sequencing and in the development of statistical methodology appropriate for genome …

Root system architecture, physiological and transcriptional traits of soybean (Glycine max L.) in response to water deficit: A review

R Xiong, S Liu, MJ Considine… - Physiologia …, 2021 - Wiley Online Library
Drought stress is the main limiting factor for global soybean growth and production. Genetic
improvement for water and nutrient uptake efficiency is critical to advance tolerance and …

Association mapping in forest trees and fruit crops

MA Khan, SS Korban - Journal of Experimental Botany, 2012 - academic.oup.com
Association mapping (AM), also known as linkage disequilibrium (LD) mapping, is a viable
approach to overcome limitations of pedigree-based quantitative trait loci (QTL) mapping. In …

Genome-wide association analysis reveals trait-linked markers for grain nutrient and agronomic traits in diverse set of chickpea germplasm

R Srungarapu, MD Mahendrakar, LA Mohammad… - Cells, 2022 - mdpi.com
Chickpea is an inexpensive source of protein, minerals, and vitamins to the poor people
living in arid and semi-arid regions of Southern Asia and Sub-Saharan Africa. New chickpea …

Genome-wide association mapping of quantitative traits in a breeding population of sugarcane

J Racedo, L Gutiérrez, MF Perera, S Ostengo… - BMC Plant …, 2016 - Springer
Background Molecular markers associated with relevant agronomic traits could significantly
reduce the time and cost involved in developing new sugarcane varieties. Previous …

Potential for marker-assisted selection for forest tree breeding: lessons from 20 years of MAS in crops

H Muranty, V Jorge, C Bastien, C Lepoittevin… - Tree Genetics & …, 2014 - Springer
For the most part, molecular markers and detection of quantitative trait loci have been
developed for forest tree species in view to performing marker-assisted selection (MAS) …

Association mapping for cold tolerance in two large maize inbred panels

P Revilla, VM Rodríguez, A Ordás, R Rincent… - BMC plant biology, 2016 - Springer
Background Breeding for cold tolerance in maize promises to allow increasing growth area
and production in temperate zones. The objective of this research was to conduct genome …

From phenotypes to causal sequences: using genome wide association studies to dissect the sequence basis for variation of plant development

T Ogura, W Busch - Current opinion in plant biology, 2015 - Elsevier
Highlights•Genome Wide Association Studies (GWASs) have been conducted in 22 plant
species.•GWASs have uncovered novel mechanisms and genes underlying variation of …

A dense SNP genetic map constructed using restriction site-associated DNA sequencing enables detection of QTLs controlling apple fruit quality

R Sun, Y Chang, F Yang, Y Wang, H Li, Y Zhao… - BMC genomics, 2015 - Springer
Background Genetic map based quantitative trait locus (QTL) analysis is an important
method for studying important horticultural traits in apple. To facilitate molecular breeding …

Cassava yield traits predicted by genomic selection methods

LRB Andrade, MB Sousa, EJ Oliveira, MDV Resende… - PLoS …, 2019 - journals.plos.org
Genomic selection (GS) has been used to optimize genetic gains when phenotypic selection
is considered costly and difficult to measure. The objective of this work was to evaluate the …