Telomere-to-telomere Citrullus super-pangenome provides direction for watermelon breeding
To decipher the genetic diversity within the cucurbit genus Citrullus, we generated telomere-
to-telomere (T2T) assemblies of 27 distinct genotypes, encompassing all seven Citrullus …
to-telomere (T2T) assemblies of 27 distinct genotypes, encompassing all seven Citrullus …
Cancer liquid biopsies by Oxford Nanopore Technologies sequencing of cell-free DNA: from basic research to clinical applications
HQ Si, P Wang, F Long, W Zhong, YD Meng, Y Rong… - Molecular Cancer, 2024 - Springer
Liquid biopsies, in particular, analysis of cell-free DNA, are expected to revolutionize the
current landscape of cancer diagnostics and treatment. However, the existing methods for …
current landscape of cancer diagnostics and treatment. However, the existing methods for …
Evolutionary origin and population diversity of a cryptic hybrid pathogen
JL Steenwyk, S Knowles, RW Bastos… - Nature …, 2024 - nature.com
Cryptic fungal pathogens pose disease management challenges due to their morphological
resemblance to known pathogens. Here, we investigated the genomes and phenotypes of …
resemblance to known pathogens. Here, we investigated the genomes and phenotypes of …
PMAT: an efficient plant mitogenome assembly toolkit using low-coverage HiFi sequencing data
Complete mitochondrial genomes (mitogenomes) of plants are valuable resources for
nucleocytoplasmic interactions, plant evolution, and plant cytoplasmic male sterile line …
nucleocytoplasmic interactions, plant evolution, and plant cytoplasmic male sterile line …
Near telomere-to-telomere genome of the model plant Physcomitrium patens
The model plant Physcomitrium patens has played a pivotal role in enhancing our
comprehension of plant evolution and development. However, the current genome harbours …
comprehension of plant evolution and development. However, the current genome harbours …
Grapevine pangenome facilitates trait genetics and genomic breeding
Z Liu, N Wang, Y Su, Q Long, Y Peng, L Shangguan… - Nature Genetics, 2024 - nature.com
Grapevine breeding is hindered by a limited understanding of the genetic basis of complex
agronomic traits. This study constructs a graph-based pangenome reference (Grapepan v …
agronomic traits. This study constructs a graph-based pangenome reference (Grapepan v …
Genome and transcriptome of Selaginella kraussiana reveal evolution of root apical meristems in vascular plants
W Liu, G Cai, N Zhai, H Wang, T Tang, Y Zhang… - Current Biology, 2023 - cell.com
The evolution of roots allowed vascular plants to adapt to land environments. Fossil
evidence indicates that roots evolved independently in euphyllophytes (ferns and seed …
evidence indicates that roots evolved independently in euphyllophytes (ferns and seed …
A near complete genome assembly of the East Friesian sheep genome
X You, Q Fang, C Chen, J Cao, S Fu, T Zhang, S Wang… - Scientific Data, 2024 - nature.com
Advancements in sequencing have enabled the assembly of numerous sheep genomes,
significantly advancing our understanding of the link between genetic variation and …
significantly advancing our understanding of the link between genetic variation and …
Large-scale snake genome analyses provide insights into vertebrate development
Snakes are a remarkable squamate lineage with unique morphological adaptations,
especially those related to the evolution of vertebrate skeletons, organs, and sensory …
especially those related to the evolution of vertebrate skeletons, organs, and sensory …
Chromosome-level genome assembly of the flower thrips Frankliniella intonsa
As an economically important insect pest, the flower thrips Frankliniella intonsa (Trybom)
causes great damage to host plants by directly feeding and indirectly transmitting various …
causes great damage to host plants by directly feeding and indirectly transmitting various …