Identifying parameter regions for multistationarity
Mathematical modelling has become an established tool for studying the dynamics of
biological systems. Current applications range from building models that reproduce …
biological systems. Current applications range from building models that reproduce …
[HTML][HTML] Advancing Mathematical Epidemiology and Chemical Reaction Network Theory via Synergies Between Them
Our paper reviews some key concepts in chemical reaction network theory and
mathematical epidemiology, and examines their intersection, with three goals. The first is to …
mathematical epidemiology, and examines their intersection, with three goals. The first is to …
Large deviations theory for Markov jump models of chemical reaction networks
We prove a sample path Large Deviation Principle (LDP) for a class of jump processes
whose rates are not uniformly Lipschitz continuous in phase space. Building on it, we further …
whose rates are not uniformly Lipschitz continuous in phase space. Building on it, we further …
Investigating synergies between chemical reaction networks (CRN) and mathematical epidemiology (ME), using the Mathematica package Epid-CRN
F Avram, R Adenane, AD Halanay… - arXiv preprint arXiv …, 2024 - arxiv.org
In this essay, we investigate some relations between Chemical Reaction Networks (CRN)
and Mathematical Epidemiology (ME) and report on several pleasant surprises which we …
and Mathematical Epidemiology (ME) and report on several pleasant surprises which we …
Robust persistence and permanence of polynomial and power law dynamical systems
JD Brunner, G Craciun - SIAM Journal on Applied Mathematics, 2018 - SIAM
A persistent dynamical system in R^d_>0 is one whose solutions have positive lower
bounds for large t, while a permanent dynamical system in R^d_>0 is one whose solutions …
bounds for large t, while a permanent dynamical system in R^d_>0 is one whose solutions …
On Persistence of Some -Endotactic Chemical Reaction Networks
Motivated by the concept of the endotactic network, a kind of special geometric structure in
chemical reaction networks developed for persistence analysis, we propose a new notion …
chemical reaction networks developed for persistence analysis, we propose a new notion …
Endotactic networks and toric differential inclusions
G Craciun, A Deshpande - SIAM Journal on Applied Dynamical Systems, 2020 - SIAM
An important dynamical property of biological interaction networks is persistence, which
intuitively means that “no species goes extinct." It has been conjectured that dynamical …
intuitively means that “no species goes extinct." It has been conjectured that dynamical …
Conditions for extinction events in chemical reaction networks with discrete state spaces
We study chemical reaction networks with discrete state spaces and present sufficient
conditions on the structure of the network that guarantee the system exhibits an extinction …
conditions on the structure of the network that guarantee the system exhibits an extinction …
[HTML][HTML] Uniform and strict persistence in monotone skew-product semiflows with applications to non-autonomous Nicholson systems
R Obaya, AM Sanz - Journal of Differential Equations, 2016 - Elsevier
We determine sufficient conditions for uniform and strict persistence in the case of skew-
product semiflows generated by solutions of non-autonomous families of cooperative …
product semiflows generated by solutions of non-autonomous families of cooperative …
Symbolic analysis of multiple steady states in a MAPK chemical reaction network
D Lichtblau - Journal of Symbolic Computation, 2021 - Elsevier
We consider the problem of analyzing chemical reaction networks that may allow multiple
positive steady states. We use tools from “classical” computer algebra (Gröbner bases over …
positive steady states. We use tools from “classical” computer algebra (Gröbner bases over …