Polyphosphate drives bacterial heterochromatin formation

F Beaufay, HM Amemiya, J Guan, J Basalla… - Science …, 2021 - science.org
Heterochromatin is most often associated with eukaryotic organisms. Yet, bacteria also
contain areas with densely protein-occupied chromatin that appear to silence gene …

Following the messenger: recent innovations in live cell single molecule fluorescence imaging

A Schmidt, G Gao, SR Little, AP Jalihal… - Wiley Interdisciplinary …, 2020 - Wiley Online Library
Messenger RNAs (mRNAs) convey genetic information from the DNA genome to proteins
and thus lie at the heart of gene expression and regulation of all cellular activities. Live cell …

[HTML][HTML] Fluorescent protein-based indicators for functional super-resolution imaging of biomolecular activities in living cells

K Lu, CQ Vu, T Matsuda, T Nagai - International journal of molecular …, 2019 - mdpi.com
Super-resolution light microscopy (SRM) offers a unique opportunity for diffraction-unlimited
imaging of biomolecular activities in living cells. To realize such potential, genetically …

[HTML][HTML] BR-bodies provide selectively permeable condensates that stimulate mRNA decay and prevent release of decay intermediates

N Al-Husini, DT Tomares, ZJ Pfaffenberger… - Molecular cell, 2020 - cell.com
Biomolecular condensates play a key role in organizing RNAs and proteins into
membraneless organelles. Bacterial RNP-bodies (BR-bodies) are a biomolecular …

Super-resolution surface-enhanced Raman scattering imaging of single particles in cells

CDL De Albuquerque, ZD Schultz - Analytical chemistry, 2020 - ACS Publications
The ability to locate and identify molecular interactions in cells has significant importance for
understanding protein function and molecular biology. Functionalized metallic nanoparticles …

NOBIAS: Analyzing anomalous diffusion in single-molecule tracks with nonparametric Bayesian inference

Z Chen, L Geffroy, J Biteen - Biophysical Journal, 2022 - cell.com
Single-molecule imaging techniques and single-particle tracking (SPT) of molecules inside
living cells investigate biomolecular dynamics at nanometer spatial resolution and …

[HTML][HTML] An experimental framework to assess biomolecular condensates in bacteria

Y Hoang, CA Azaldegui, RE Dow, M Ghalmi… - Nature …, 2024 - nature.com
High-resolution imaging of biomolecular condensates in living cells is essential for
correlating their properties to those observed through in vitro assays. However, such …

Enabling spectrally resolved single-molecule localization microscopy at high emitter densities

KJA Martens, M Gobes, E Archontakis, RR Brillas… - Nano Letters, 2022 - ACS Publications
Single-molecule localization microscopy (SMLM) is a powerful super-resolution technique
for elucidating structure and dynamics in the life-and material sciences. Simultaneously …

DNA methylation and RNA-DNA hybrids regulate the single-molecule localization of a DNA methyltransferase on the bacterial nucleoid

NL Fernandez, Z Chen, DEH Fuller, LA van Gijtenbeek… - MBio, 2023 - Am Soc Microbiol
Bacterial DNA methyltransferases (MTases) function in restriction modification systems, cell
cycle control, and the regulation of gene expression. DnmA is a recently described DNA …

Toward quantitative nanothermometry using single-molecule counting

PA Reinhardt, AP Crawford, CA West… - The Journal of …, 2021 - ACS Publications
Photothermal heating of nanoparticles has applications in nanomedicine, photocatalysis,
photoelectrochemistry, and data storage, but accurate measurements of temperature at the …