Alternative splicing regulatory networks: functions, mechanisms, and evolution
J Ule, BJ Blencowe - Molecular cell, 2019 - cell.com
High-throughput sequencing-based methods and their applications in the study of
transcriptomes have revolutionized our understanding of alternative splicing. Networks of …
transcriptomes have revolutionized our understanding of alternative splicing. Networks of …
The RNA polymerase II carboxy-terminal domain (CTD) code
D Eick, M Geyer - Chemical reviews, 2013 - ACS Publications
The smallest viable unit of life is the cell. From bacteria to mammals, all cells use the same
nucleic acid-based universal code for the maintenance and inheritance of genetic …
nucleic acid-based universal code for the maintenance and inheritance of genetic …
Genomic insights into the Ixodes scapularis tick vector of Lyme disease
Ticks transmit more pathogens to humans and animals than any other arthropod. We
describe the 2.1 Gbp nuclear genome of the tick, Ixodes scapularis (Say), which vectors …
describe the 2.1 Gbp nuclear genome of the tick, Ixodes scapularis (Say), which vectors …
Circular RNA is expressed across the eukaryotic tree of life
PL Wang, Y Bao, MC Yee, SP Barrett, GJ Hogan… - PloS one, 2014 - journals.plos.org
An unexpectedly large fraction of genes in metazoans (human, mouse, zebrafish, worm, fruit
fly) express high levels of circularized RNAs containing canonical exons. Here we report that …
fly) express high levels of circularized RNAs containing canonical exons. Here we report that …
Ancient gene capture and recent gene loss shape the evolution of orthopoxvirus-host interaction genes
The survival of viruses depends on their ability to resist host defenses and, of all animal virus
families, the poxviruses have the most antidefense genes. Orthopoxviruses (ORPV), a genus …
families, the poxviruses have the most antidefense genes. Orthopoxviruses (ORPV), a genus …
Analysis of the Genome and Transcriptome of Cryptococcus neoformans var. grubii Reveals Complex RNA Expression and Microevolution Leading to Virulence …
G Janbon, KL Ormerod, D Paulet, EJ Byrnes III… - PLoS …, 2014 - journals.plos.org
Cryptococcus neoformans is a pathogenic basidiomycetous yeast responsible for more than
600,000 deaths each year. It occurs as two serotypes (A and D) representing two varieties …
600,000 deaths each year. It occurs as two serotypes (A and D) representing two varieties …
Origin and evolution of spliceosomal introns
Evolution of exon-intron structure of eukaryotic genes has been a matter of long-standing,
intensive debate. The introns-early concept, later rebranded 'introns first'held that protein …
intensive debate. The introns-early concept, later rebranded 'introns first'held that protein …
Genome reduction as the dominant mode of evolution
YI Wolf, EV Koonin - Bioessays, 2013 - Wiley Online Library
A common belief is that evolution generally proceeds towards greater complexity at both the
organismal and the genomic level, numerous examples of reductive evolution of parasites …
organismal and the genomic level, numerous examples of reductive evolution of parasites …
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida
Red seaweeds are key components of coastal ecosystems and are economically important
as food and as a source of gelling agents, but their genes and genomes have received little …
as food and as a source of gelling agents, but their genes and genomes have received little …