State-dependent evolutionary models reveal modes of solid tumour growth

MA Lewinsohn, T Bedford, NF Müller… - Nature Ecology & …, 2023 - nature.com
Spatial properties of tumour growth have profound implications for cancer progression,
therapeutic resistance and metastasis. Yet, how spatial position governs tumour cell division …

Cell type evolution reconstruction across species through cell phylogenies of single-cell RNA sequencing data

JL Mah, CW Dunn - Nature Ecology & Evolution, 2024 - nature.com
The origin and evolution of cell types has emerged as a key topic in evolutionary biology.
Driven by rapidly accumulating single-cell datasets, recent attempts to infer cell type …

Reconstructing cell type evolution across species through cell phylogenies of single-cell RNAseq data

JL Mah, CW Dunn - bioRxiv, 2023 - biorxiv.org
The origin and evolution of cell types has emerged as a key topic in evolutionary biology.
Driven by rapidly accumulating single-cell datasets, recent attempts to infer cell type …

Genomic and Transcriptomic Variant Detection through Long-read Single-cell RNA Sequencing in Ovarian Cancer

A Dondi - 2024 - research-collection.ethz.ch
During cancer development, clonal subpopulations with distinct genotypes and phenotypes
appear within a tumor, and some subpopulations might develop resistance to cancer …

Phylogenetic inference from single-cell RNA-seq data

X Liu, JI Griffiths, I Bishara, J Liu, AH Bild, JT Chang - Scientific Reports, 2023 - nature.com
Tumors are comprised of subpopulations of cancer cells that harbor distinct genetic profiles
and phenotypes that evolve over time and during treatment. By reconstructing the course of …