The mitochondrial (mt) genome is, to date, the most extensively studied genomic system in
insects, outnumbering nuclear genomes tenfold and representing all orders versus very few …

Many years of extensive studies of metazoan mitochondrial genomes have established
differences in gene arrangements and genetic codes as valuable phylogenetic markers …

Abstract Background PacBio high fidelity (HiFi) sequencing reads are both long (15–20 kb)
and highly accurate (> Q20). Because of these properties, they have revolutionised genome …

Abstract tRNAscan-SE has been widely used for transfer RNA (tRNA) gene prediction for
over twenty years, developed just as the first genomes were decoded. With the massive …

Mitochondrial genome (mitogenome) plays important roles in evolutionary and ecological
studies. It becomes routine to utilize multiple genes on mitogenome or the entire …

With the rapid increase of sequenced metazoan mitochondrial genomes, a detailed manual
annotation is becoming more and more infeasible. While it is easy to identify the …

Abstract MitoFish, MitoAnnotator, and MiFish Pipeline are comprehensive databases of fish
mitochondrial genomes (mitogenomes), accurate annotation software of fish mitogenomes …

About 2000 completely sequenced mitochondrial genomes are available from the NCBI
RefSeq data base together with manually curated annotations of their protein-coding genes …

Mitofish is a database of fish mitochondrial genomes (mitogenomes) that includes powerful
and precise de novo annotations for mitogenome sequences. Fish occupy an important …

Background The ability to generate long sequencing reads and access long-range linkage
information is revolutionizing the quality and completeness of genome assemblies. Here we …