ChemoPy: freely available python package for computational biology and chemoinformatics
Motivation: Molecular representation for small molecules has been routinely used in
QSAR/SAR, virtual screening, database search, ranking, drug ADME/T prediction and other …
QSAR/SAR, virtual screening, database search, ranking, drug ADME/T prediction and other …
Characterization of structure–antioxidant activity relationship of peptides in free radical systems using QSAR models: Key sequence positions and their amino acid …
YW Li, B Li - Journal of Theoretical Biology, 2013 - Elsevier
Antioxidative peptides have attracted increasing attention from researchers because of their
antioxidant properties as natural materials in functional food and for applications in …
antioxidant properties as natural materials in functional food and for applications in …
Role of dopamine signaling in drug addiction
W Chen, Z Nong, Y Li, J Huang… - Current topics in …, 2017 - ingentaconnect.com
Addiction is a chronic, relapsing disease of the brain that includes drug-induced compulsive
seeking behavior and consumption of drugs. Dopamine (DA) is considered to be critical in …
seeking behavior and consumption of drugs. Dopamine (DA) is considered to be critical in …
Biologically active 4-thiazolidinones: a review of QSAR studies and QSAR modeling of antitumor activity
O Devinyak, B Zimenkovsky… - Current Topics in …, 2012 - ingentaconnect.com
4-Thiazolidinone is a promising scaffold for the search of new potential antibacterial,
antiviral, antidiabetic and anticancer agents etc. SAR analysis of the most potent compounds …
antiviral, antidiabetic and anticancer agents etc. SAR analysis of the most potent compounds …
[HTML][HTML] Design novel dual agonists for treating type-2 diabetes by targeting peroxisome proliferator-activated receptors with core hopping approach
Y Ma, SQ Wang, WR Xu, RL Wang, KC Chou - PLoS One, 2012 - journals.plos.org
Owing to their unique functions in regulating glucose, lipid and cholesterol metabolism,
PPARs (peroxisome proliferator-activated receptors) have drawn special attention for …
PPARs (peroxisome proliferator-activated receptors) have drawn special attention for …
[HTML][HTML] Predicting biological functions of compounds based on chemical-chemical interactions
Given a compound, how can we effectively predict its biological function? It is a
fundamentally important problem because the information thus obtained may benefit the …
fundamentally important problem because the information thus obtained may benefit the …
Alignment-free prediction of a drug− target complex network based on parameters of drug connectivity and protein sequence of receptors
D Vina, E Uriarte, F Orallo… - Molecular …, 2009 - ACS Publications
There are many drugs described with very different affinity to a large number of receptors. In
this work, we selected drug− receptor pairs (DRPs) of affinity/nonaffinity drugs to …
this work, we selected drug− receptor pairs (DRPs) of affinity/nonaffinity drugs to …
Molecular dynamics studies on the interactions of PTP1B with inhibitors: from the first phosphate-binding site to the second one
Protein tyrosine phosphatases 1B (PTP1B) is a major negative regulator of both insulin and
leptin signaling pathways. In view of this, it becomes an important target for drug …
leptin signaling pathways. In view of this, it becomes an important target for drug …
[HTML][HTML] Prediction of the aquatic toxicity of aromatic compounds to tetrahymena pyriformis through support vector regression
Toxicity evaluation is an extremely important process during drug development. It is usually
initiated by experiments on animals, which is time-consuming and costly. To speed up such …
initiated by experiments on animals, which is time-consuming and costly. To speed up such …
MIND-BEST: Web Server for Drugs and Target Discovery; Design, Synthesis, and Assay of MAO-B Inhibitors and Theoretical− Experimental Study of G3PDH Protein …
H González-Díaz, F Prado-Prado… - Journal of proteome …, 2011 - ACS Publications
Many drugs with very different affinity to a large number of receptors are described. Thus, in
this work, we selected drug− target pairs (DTPs/nDTPs) of drugs with high affinity/nonaffinity …
this work, we selected drug− target pairs (DTPs/nDTPs) of drugs with high affinity/nonaffinity …