FreeSurfer

B Fischl - Neuroimage, 2012 - Elsevier
FreeSurfer is a suite of tools for the analysis of neuroimaging data that provides an array of
algorithms to quantify the functional, connectional and structural properties of the human …

DTI analyses and clinical applications in Alzheimer's disease

K Oishi, MM Mielke, M Albert… - Journal of Alzheimer's …, 2011 - content.iospress.com
DTI is one of the most effective MR tools for the investigation of the brain anatomy. In
addition to the gray matter, histopathological studies indicate that white matter is also a good …

The impact of traditional neuroimaging methods on the spatial localization of cortical areas

TS Coalson, DC Van Essen… - Proceedings of the …, 2018 - National Acad Sciences
Localizing human brain functions is a long-standing goal in systems neuroscience. Toward
this goal, neuroimaging studies have traditionally used volume-based smoothing, registered …

Connectivity precedes function in the development of the visual word form area

ZM Saygin, DE Osher, ES Norton, DA Youssoufian… - Nature …, 2016 - nature.com
What determines the cortical location at which a given functionally specific region will arise
in development? We tested the hypothesis that functionally specific regions develop in their …

Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy

A Yendiki, P Panneck, P Srinivasan… - Frontiers in …, 2011 - frontiersin.org
We have developed a method for automated probabilistic reconstruction of a set of major
white-matter pathways from diffusion-weighted MR images. Our method is called TRACULA …

Quantitative susceptibility mapping in Parkinson's disease

C Langkammer, L Pirpamer, S Seiler, A Deistung… - PLoS …, 2016 - journals.plos.org
Background Quantitative susceptibility mapping (QSM) and R2* relaxation rate mapping
have demonstrated increased iron deposition in the substantia nigra of patients with …

Age-associated reductions in cerebral blood flow are independent from regional atrophy

JJ Chen, HD Rosas, DH Salat - Neuroimage, 2011 - Elsevier
Prior studies have demonstrated decreasing cerebral blood flow (CBF) in normal aging, but
the full spatial pattern and potential mechanism of changes in CBF remain to be elucidated …

Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age

SS Ghosh, S Kakunoori, J Augustinack… - Neuroimage, 2010 - Elsevier
Understanding the neurophysiology of human cognitive development relies on methods that
enable accurate comparison of structural and functional neuroimaging data across brains …

[HTML][HTML] Improving alignment in tract-based spatial statistics: evaluation and optimization of image registration

M De Groot, MW Vernooij, S Klein, MA Ikram, FM Vos… - Neuroimage, 2013 - Elsevier
Anatomical alignment in neuroimaging studies is of such importance that considerable effort
is put into improving the registration used to establish spatial correspondence. Tract-based …

Propofol disrupts alpha dynamics in functionally distinct thalamocortical networks during loss of consciousness

VS Weiner, DW Zhou, P Kahali… - Proceedings of the …, 2023 - National Acad Sciences
During propofol-induced general anesthesia, alpha rhythms measured using
electroencephalography undergo a striking shift from posterior to anterior, termed …