Coordination of microbial metabolism
Beyond fuelling cellular activities with building blocks and energy, metabolism also
integrates environmental conditions into intracellular signals. The underlying regulatory …
integrates environmental conditions into intracellular signals. The underlying regulatory …
Advancing metabolic models with kinetic information
Highlights•Kinetic models are crucial to understand complex dynamic processes.•Not all
model parameters need to be known precisely due to overlapping regulatory …
model parameters need to be known precisely due to overlapping regulatory …
Improving fatty acids production by engineering dynamic pathway regulation and metabolic control
Global energy demand and environmental concerns have stimulated increasing efforts to
produce carbon-neutral fuels directly from renewable resources. Microbially derived …
produce carbon-neutral fuels directly from renewable resources. Microbially derived …
Metabolic profiling of cancer cells reveals genome-wide crosstalk between transcriptional regulators and metabolism
Transcriptional reprogramming of cellular metabolism is a hallmark of cancer. However,
systematic approaches to study the role of transcriptional regulators (TRs) in mediating …
systematic approaches to study the role of transcriptional regulators (TRs) in mediating …
Glucose becomes one of the worst carbon sources for E.coli on poor nitrogen sources due to suboptimal levels of cAMP
In most conditions, glucose is the best carbon source for E. coli: it provides faster growth
than other sugars and is consumed first in sugar mixtures. Here we identify conditions in …
than other sugars and is consumed first in sugar mixtures. Here we identify conditions in …
Negative feedback regulation of fatty acid production based on a malonyl-CoA sensor–actuator
Engineering metabolic biosynthetic pathways has enabled the microbial production of many
useful chemicals. However, pathway productivities and yields are often limited by metabolic …
useful chemicals. However, pathway productivities and yields are often limited by metabolic …
Transcriptional regulation is insufficient to explain substrate‐induced flux changes in Bacillus subtilis
One of the key ways in which microbes are thought to regulate their metabolism is by
modulating the availability of enzymes through transcriptional regulation. However, the …
modulating the availability of enzymes through transcriptional regulation. However, the …
Design of four small-molecule-inducible systems in the yeast chromosome, applied to optimize terpene biosynthesis
The optimization of cellular functions often requires the balancing of gene expression, but
the physical construction and screening of alternative designs are costly and time …
the physical construction and screening of alternative designs are costly and time …
[PDF][PDF] Allosteric feedback inhibition enables robust amino acid biosynthesis in E. coli by enforcing enzyme overabundance
Microbes must ensure robust amino acid metabolism in the face of external and internal
perturbations. This robustness is thought to emerge from regulatory interactions in metabolic …
perturbations. This robustness is thought to emerge from regulatory interactions in metabolic …
Dissecting specific and global transcriptional regulation of bacterial gene expression
Gene expression is regulated by specific transcriptional circuits but also by the global
expression machinery as a function of growth. Simultaneous specific and global regulation …
expression machinery as a function of growth. Simultaneous specific and global regulation …