The dependence of viral RNA replication on co-opted host factors

PD Nagy, J Pogany - Nature Reviews Microbiology, 2012 - nature.com
Abstract Positive-sense RNA ((+) RNA) viruses such as hepatitis C virus exploit host cells by
subverting host proteins, remodelling subcellular membranes, co-opting and modulating …

A structure-function diversity survey of the RNA-dependent RNA polymerases from the positive-strand RNA viruses

H Jia, P Gong - Frontiers in Microbiology, 2019 - frontiersin.org
The RNA-dependent RNA polymerases (RdRPs) encoded by the RNA viruses are a unique
class of nucleic acid polymerases. Each viral RdRP contains a 500–600 residue catalytic …

The unexpected roles of eukaryotic translation elongation factors in RNA virus replication and pathogenesis

D Li, T Wei, CM Abbott, D Harrich - Microbiology and Molecular …, 2013 - Am Soc Microbiol
The prokaryotic translation elongation factors were identified as essential cofactors for RNA-
dependent RNA polymerase activity of the bacteriophage Qβ more than 40 years ago. A …

[HTML][HTML] Emerging picture of host chaperone and cyclophilin roles in RNA virus replication

PD Nagy, RY Wang, J Pogany, A Hafren, K Makinen - Virology, 2011 - Elsevier
Many plus-strand (+) RNA viruses co-opt protein chaperones from the host cell to assist the
synthesis, localization and folding of abundant viral proteins, to regulate viral replication via …

Diverse roles of host RNA binding proteins in RNA virus replication

Z Li, PD Nagy - RNA biology, 2011 - Taylor & Francis
Plus-strand (+) RNA viruses co-opt host RNA-binding proteins (RBPs) to perform many
functions during viral replication. A few host RBPs have been identified that affect the …

Recent advances in structural studies of single-stranded RNA bacteriophages

J Thongchol, Z Lill, Z Hoover, J Zhang - Viruses, 2023 - mdpi.com
Positive-sense single-stranded RNA (ssRNA) bacteriophages (phages) were first isolated
six decades ago. Since then, extensive research has been conducted on these ssRNA …

Roles of protein synthesis elongation factor EF‐Tu in heat tolerance in plants

J Fu, I Momčilović, PVV Prasad - Journal of Botany, 2012 - Wiley Online Library
EF‐Tu proteins of plastids, mitochondria, and the cytosolic counterpart EF‐1α in plants, as
well as EF‐Tu proteins of bacteria, are highly conserved and multifunctional. The functions …

A transcription fork model for pol IV and pol v–dependent RNA-directed DNA methylation

CS Pikaard, JR Haag, OMF Pontes… - Cold Spring Harbor …, 2012 - symposium.cshlp.org
In Arabidopsis thaliana, nuclear multisubunit RNA polymerase IV (Pol IV) and RNA-
DEPENDENT RNA POLYMERASE 2 (RDR2) are required for the biogenesis of 24 …

Allosteric activation of SARS-CoV-2 RNA-dependent RNA polymerase by remdesivir triphosphate and other phosphorylated nucleotides

B Wang, V Svetlov, YI Wolf, EV Koonin, E Nudler… - MBio, 2021 - Am Soc Microbiol
The catalytic subunit of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
RNA-dependent RNA polymerase (RdRp) Nsp12 has a unique nidovirus RdRp-associated …

Evolution of tertiary structure of viral RNA dependent polymerases

J Černý, B Černá Bolfíková, JJ Valdes, L Grubhoffer… - PloS one, 2014 - journals.plos.org
Viral RNA dependent polymerases (vRdPs) are present in all RNA viruses; unfortunately,
their sequence similarity is too low for phylogenetic studies. Nevertheless, vRdP protein …