Combining multi-marker metabarcoding and digital holography to describe eukaryotic plankton across the Newfoundland Shelf

L MacNeil, DK Desai, M Costa, J LaRoche - Scientific Reports, 2022 - nature.com
The planktonic diversity throughout the oceans is vital to ecosystem functioning and linked to
environmental change. Plankton monitoring tools have advanced considerably with high …

Skimming genomes for systematics and DNA barcodes of corals

AM Quattrini, LJ McCartin, EE Easton… - Ecology and …, 2024 - Wiley Online Library
Numerous genomic methods developed over the past two decades have enabled the
discovery and extraction of orthologous loci to help resolve phylogenetic relationships …

[HTML][HTML] Advancements in DNA Metabarcoding Protocols for Monitoring Zooplankton in Marine and Brackish Environments

J Moutinho, FO Costa, S Duarte - Journal of Marine Science and …, 2024 - mdpi.com
Over the past century, numerous studies have proposed various organisms for the
biomonitoring of aquatic systems, but only recently has zooplankton emerged as a …

medna-metadata: an open-source data management system for tracking environmental DNA samples and metadata

M Kimble, S Allers, K Campbell, C Chen… - …, 2022 - academic.oup.com
Abstract Motivation Environmental DNA (eDNA), as a rapidly expanding research field,
stands to benefit from shared resources including sampling protocols, study designs …

New insights into biodiversity, biogeography, ecology, and evolution of marine zooplankton based on molecular approaches

A Bucklin, KTCA Peijnenburg… - ICES Journal of …, 2021 - academic.oup.com
Marine zooplankton are key players in pelagic food webs, central links in ecosystem
function, useful indicators of water masses, and rapid responders to environmental variation …

Metabarcoding reveals seasonal and spatial patterns of arthropod community assemblages in two contrasting habitats: Desert and oasis of the Baja California …

A Klimova, R Rodríguez‐Estrella… - Diversity and …, 2023 - Wiley Online Library
Aim Desert springs or oases are the only permanent mesic environments in highly water‐
limited arid regions. Oases have immense cultural, evolutionary and ecological importance …

[PDF][PDF]  Maximizing the reliability and the number of species assignments in metabarcoding studies using a curated regional library and a public repository

A Bourret, C Nozères, E Parent… - Metabarcoding and …, 2023 - mbmg.pensoft.net
Maximizing the reliability and the number of species assignments in metabarcoding studies
using a curated regional library and a Page 1 Maximizing the reliability and the number of …

Polychaetes (Annelida) of Cyprus (Eastern Mediterranean Sea): An updated and annotated checklist including new distribution records

M Rousou, J Langeneck, C Apserou, C Arvanitidis… - Diversity, 2023 - mdpi.com
The diversity and distribution of polychaetes in the coastal area and the EEZ of the Republic
of Cyprus is presented based on both the literature records and new data acquired in a wide …

The microcopepod family Oncaeidae: state of knowledge and perspectives

R Böttger-Schnack, D Schnack - Marine Biology, 2023 - Springer
Since the discovery of the first oncaeid copepod described by Philippi in 1843 as Oncaea
venusta, great progress has been achieved regarding the morphological/descriptive …

Characterizing Crustose Lichen Communities—DNA Metabarcoding Reveals More than Meets the Eye

JR Henrie, BM Thomson, AA Yungfleisch, M Kerr… - Diversity, 2022 - mdpi.com
Biodiversity inventories are important for informing land management strategies,
conservation efforts, and for biomonitoring studies. For many organismal groups, including …