High throughput sequencing methods and analysis for microbiome research

JM Di Bella, Y Bao, GB Gloor, JP Burton… - Journal of microbiological …, 2013 - Elsevier
High-throughput sequencing technology is rapidly improving in quality, speed and cost. It is
therefore becoming more widely used to study whole communities of prokaryotes in many …

Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria

B Gao, RS Gupta - Microbiology and molecular biology reviews, 2012 - Am Soc Microbiol
The phylum Actinobacteria harbors many important human pathogens and also provides
one of the richest sources of natural products, including numerous antibiotics and other …

[HTML][HTML] A gene-by-gene population genomics platform: de novo assembly, annotation and genealogical analysis of 108 representative Neisseria meningitidis …

HB Bratcher, C Corton, KA Jolley, J Parkhill… - BMC genomics, 2014 - Springer
Background Highly parallel,'second generation'sequencing technologies have rapidly
expanded the number of bacterial whole genome sequences available for study, permitting …

[HTML][HTML] Cell envelope of corynebacteria: structure and influence on pathogenicity

A Burkovski - International scholarly research notices, 2013 - hindawi.com
To date the genus Corynebacterium comprises 88 species. More than half of these are
connected to human and animal infections, with the most prominent member of the …

[HTML][HTML] The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi …

SC Soares, A Silva, E Trost, J Blom, R Ramos… - PLoS …, 2013 - journals.plos.org
Corynebacterium pseudotuberculosis is a facultative intracellular pathogen and the
causative agent of several infectious and contagious chronic diseases, including caseous …

[HTML][HTML] Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains

JC Ruiz, V D'Afonseca, A Silva, A Ali, AC Pinto… - PloS one, 2011 - journals.plos.org
Background Corynebacterium pseudotuberculosi s, a Gram-positive, facultative intracellular
pathogen, is the etiologic agent of the disease known as caseous lymphadenitis (CL). CL …

[HTML][HTML] Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors

E Trost, A Al-Dilaimi, P Papavasiliou, J Schneider… - BMC genomics, 2011 - Springer
Background Corynebacterium ulcerans has been detected as a commensal in domestic and
wild animals that may serve as reservoirs for zoonotic infections. During the last decade, the …

[HTML][HTML] Evaluation of ERIC-PCR as Genotyping Method for Corynebacterium pseudotuberculosis Isolates

EMS Dorneles, JA Santana, D Ribeiro, FA Dorella… - PLoS …, 2014 - journals.plos.org
The aim of this study was to evaluate the Enterobacterial Repetitive Intergenic Consensus
(ERIC-PCR) as a tool for molecular typing of C. pseudotuberculosis isolates from eight …

A Novel Comparative Genomics Analysis for Common Drug and Vaccine Targets in Corynebacterium pseudotuberculosis and other CMN Group of Human …

D Barh, N Jain, S Tiwari, BP Parida… - Chemical biology & …, 2011 - Wiley Online Library
Caseous lymphadenitis is a chronic goat and sheep disease caused by Corynebacterium
pseudotuberculosis (Cp) that accounts for a huge economic loss worldwide. Proper …

Corynebacterium pseudotuberculosis Pneumonia in a Veterinary Student Infected During Laboratory Work

L Heggelund, P Gaustad, OE Håvelsrud… - Open forum …, 2015 - academic.oup.com
We present a case of Corynebacterium pseudotuberculosis pneumonia in a veterinary
student, with molecular genetic evidence of acquisition during laboratory work, an …