[HTML][HTML] Regulatory RNAs in bacteria
LS Waters, G Storz - Cell, 2009 - cell.com
Bacteria possess numerous and diverse means of gene regulation using RNA molecules,
including mRNA leaders that affect expression in cis, small RNAs that bind to proteins or …
including mRNA leaders that affect expression in cis, small RNAs that bind to proteins or …
Base pairing small RNAs and their roles in global regulatory networks
Bacteria use a range of RNA regulators collectively termed small RNAs (sRNAs) to help
respond to changes in the environment. Many sRNAs regulate their target mRNAs through …
respond to changes in the environment. Many sRNAs regulate their target mRNAs through …
Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments
Competitive endogenous (ce) RNAs cross-regulate each other through sequestration of
shared microRNAs and form complex regulatory networks based on their microRNA …
shared microRNAs and form complex regulatory networks based on their microRNA …
A quasi-integral controller for adaptation of genetic modules to variable ribosome demand
The behavior of genetic circuits is often poorly predictable. A gene's expression level is not
only determined by the intended regulators, but also affected by changes in ribosome …
only determined by the intended regulators, but also affected by changes in ribosome …
[HTML][HTML] A 3′ external transcribed spacer in a tRNA transcript acts as a sponge for small RNAs to prevent transcriptional noise
D Lalaouna, MC Carrier, S Semsey, JS Brouard… - Molecular cell, 2015 - cell.com
During ribosomal and transfer RNA maturation, external transcribed spacer (ETS) and
internal transcribed spacer (ITS) sequences are excised and, as non-functional by-products …
internal transcribed spacer (ITS) sequences are excised and, as non-functional by-products …
A quantitative comparison of sRNA‐based and protein‐based gene regulation
Small non‐coding RNAs (sRNAs) have important functions as genetic regulators in
prokaryotes. sRNAs act post‐transcriptionally through complementary pairing with target …
prokaryotes. sRNAs act post‐transcriptionally through complementary pairing with target …
Bacterial transcriptomics: what is beyond the RNA horiz-ome?
M Güell, E Yus, M Lluch-Senar, L Serrano - Nature Reviews …, 2011 - nature.com
Over the past 3 years, bacterial transcriptomics has undergone a massive revolution.
Increased sequencing capacity and novel tools have made it possible to explore the …
Increased sequencing capacity and novel tools have made it possible to explore the …
Redox cofactor engineering in industrial microorganisms: strategies, recent applications and future directions
J Liu, H Li, G Zhao, Q Caiyin… - Journal of Industrial …, 2018 - academic.oup.com
NAD and NADP, a pivotal class of cofactors, which function as essential electron donors or
acceptors in all biological organisms, drive considerable catabolic and anabolic reactions …
acceptors in all biological organisms, drive considerable catabolic and anabolic reactions …
Modelling competing endogenous RNA networks
MicroRNAs (miRNAs) are small RNA molecules, about 22 nucleotide long, which post-
transcriptionally regulate their target messenger RNAs (mRNAs). They accomplish key roles …
transcriptionally regulate their target messenger RNAs (mRNAs). They accomplish key roles …
Small RNAs establish gene expression thresholds
E Levine, T Hwa - Current opinion in microbiology, 2008 - Elsevier
The central role of small RNAs in regulating bacterial gene expression has been elucidated
in the past years. Typically, small RNAs act via specific basepairing with target mRNAs …
in the past years. Typically, small RNAs act via specific basepairing with target mRNAs …