[HTML][HTML] A comprehensive review of image analysis methods for microorganism counting: from classical image processing to deep learning approaches

J Zhang, C Li, MM Rahaman, Y Yao, P Ma… - Artificial Intelligence …, 2022 - Springer
Microorganisms such as bacteria and fungi play essential roles in many application fields,
like biotechnique, medical technique and industrial domain. Microorganism counting …

[HTML][HTML] An overview of watershed algorithm implementations in open source libraries

AS Kornilov, IV Safonov - Journal of Imaging, 2018 - mdpi.com
Watershed is a widespread technique for image segmentation. Many researchers apply the
method implemented in open source libraries without a deep understanding of its …

Spectrophotometer on-the-go: The development of a 2-in-1 UV–Vis portable Arduino-based spectrophotometer

JJ Poh, WL Wu, NWJ Goh, SMX Tan… - Sensors and Actuators A …, 2021 - Elsevier
The spectrophotometer is an important common analytical equipment that measures the
concentration of analytes via their absorbance of light at specific wavelengths. However, its …

Methods to monitor bacterial growth and replicative rates at the single-cell level

FC Marro, F Laurent, J Josse… - FEMS Microbiology …, 2022 - academic.oup.com
The heterogeneity of bacterial growth and replicative rates within a population was
proposed a century ago notably to explain the presence of bacterial persisters. The term …

[HTML][HTML] Microbial contamination of diesel-biodiesel blends in storage tank; an analysis of colony morphology

LN Komariah, S Arita, M Rendana, C Ramayanti… - Heliyon, 2022 - cell.com
Fuel contamination is a major issue that comes with the utilization of biodiesel. Microbial
growth is one of the primary causes of contamination during fuel handling and storage. This …

An experimental setup and segmentation method for CFU counting on agar plate for the assessment of drinking water

P Arora, S Tewary, S Krishnamurthi… - Journal of Microbiological …, 2023 - Elsevier
Quantification of bacterial colonies on an agar plate is a daily routine for a microbiologist to
determine the number of viable microorganisms in the sample. In general, microbiologists …

A smart device application for the automated determination of E. coli colonies on agar plates

J Austerjost, D Marquard, L Raddatz… - Engineering in Life …, 2017 - Wiley Online Library
The manual counting of colonies on agar plates to estimate the number of viable organisms
(so‐called colony‐forming units–CFUs) in a defined sample is a commonly used method in …

[HTML][HTML] Image analysis semi-automatic system for colony-forming-unit counting

PM Rodrigues, J Luís, FK Tavaria - Bioengineering, 2022 - mdpi.com
Background: Accurate quantitative analysis of microorganisms is recognized as an essential
tool for gauging safety and quality in microbiology settings in a wide range of fields. The …

[HTML][HTML] Engineering Ag43 signal peptides with bacterial display and selection

DWS Koh, JH Tay, SKE Gan - Methods and Protocols, 2022 - mdpi.com
Protein display, secretion, and export in prokaryotes are essential for utilizing microbial
systems as engineered living materials, medicines, biocatalysts, and protein factories. To …

Automatic segmentation method for CFU counting in single plate-serial dilution

DT Boukouvalas, RA Prates, CRL Leal… - … and Intelligent Laboratory …, 2019 - Elsevier
Quantification of colony forming units (CFU) on microbial cultures prepared according to the
standard spread plate technique is a daily laboratory routine that requires significant …