Predicting the immune escape of SARS-CoV-2 neutralizing antibodies upon mutation

D Sharma, P Rawat, V Greiff, V Janakiraman… - … et Biophysica Acta (BBA …, 2024 - Elsevier
COVID-19 has resulted in millions of deaths and severe impact on economies worldwide.
Moreover, the emergence of SARS-CoV-2 variants presented significant challenges in …

A fractional SEIQR model on diphtheria disease

M Ghani, IQ Utami, FW Triyayuda, M Afifah - Modeling Earth Systems and …, 2023 - Springer
The purpose of this paper is to study a fractional mathematical model on diphtheria disease,
considering the parameters of natural immunity, treatment, and vaccination. This model …

Understanding the mutational frequency in SARS-CoV-2 proteome using structural features

P Rawat, D Sharma, M Pandey, R Prabakaran… - Computers in biology …, 2022 - Elsevier
The prolonged transmission of the severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) virus in the human population has led to demographic divergence and the …

A Fuzzy Fractional Order Approach to SIDARTHE Epidemic Model for COVID‐19

P Chellamani, K Julietraja, A Alsinai, H Ahmed - Complexity, 2022 - Wiley Online Library
In this paper, a novel coronavirus SIDARTHE epidemic model system is constructed using a
Caputo‐type fuzzy fractional differential equation. Applying Caputo derivatives to our model …

Dynamics of COVID‐19 Using SEIQR Epidemic Model

N Avinash, G Britto Antony Xavier… - Journal of …, 2022 - Wiley Online Library
The major goal of this study is to create an optimal technique for managing COVID‐19
spread by transforming the SEIQR model into a dynamic (multistage) programming problem …

Identifying hidden target nodes for spreading in complex networks

H Yin, A Zhang, A Zeng - Chaos, Solitons & Fractals, 2023 - Elsevier
Using measurable data to realize targeted spreading of vital nodes in complex networks is
an important issue connecting to various real applications such as commercial advertising …

Dynamic decomposition of transcriptome responses during plant effector-triggered immunity revealed conserved responses in two distinct cell populations

X Liu, D Igarashi, RA Hillmer, T Stoddard, Y Lu… - bioRxiv, 2022 - biorxiv.org
Rapid plant immune responses in the appropriate cells are needed for effective defense
against pathogens. Although transcriptome analysis is often used to describe overall …

[PDF][PDF] Mathematical analysis of new SEIQR model via Laplace Adomian decomposition method

N Jeeva, KM Dharmalingam - Indian J. Nat. Sci, 2024 - researchgate.net
This study focuses on a novel mathematical model for the coronavirus, building upon the
SEIQR epidemiological framework while incorporating a unique compartment for isolation or …

Decomposition of dynamic transcriptomic responses during effector-triggered immunity reveals conserved responses in two distinct plant cell populations

X Liu, D Igarashi, RA Hillmer, T Stoddard, Y Lu… - Plant …, 2024 - cell.com
Rapid plant immune responses in the appropriate cells are needed for effective defense
against pathogens. Although transcriptome analysis is often used to describe overall …

The kinetics and basal levels of the transcriptome response during Effector-Triggered Immunity in Arabidopsis are mainly controlled by four immune signaling sectors

RA Hillmer, D Igarashi, T Stoddard, Y Lu, X Liu… - bioRxiv, 2023 - biorxiv.org
To observe the transcriptome response during Effector-Triggered Immunity (ETI) without
complications from any other pathogen factors or heterogeneously responding cell …