The foundations and development of lipidomics

X Han, RW Gross - Journal of lipid research, 2022 - ASBMB
For over a century, the importance of lipid metabolism in biology was recognized but difficult
to mechanistically understand due to the lack of sensitive and robust technologies for …

New software tools, databases, and resources in metabolomics: Updates from 2020

BB Misra - Metabolomics, 2021 - Springer
Background Precision medicine, space exploration, drug discovery to characterization of
dark chemical space of habitats and organisms, metabolomics takes a centre stage in …

Guiding the choice of informatics software and tools for lipidomics research applications

Z Ni, M Wölk, G Jukes, K Mendivelso Espinosa… - Nature …, 2023 - nature.com
Progress in mass spectrometry lipidomics has led to a rapid proliferation of studies across
biology and biomedicine. These generate extremely large raw datasets requiring …

Utilizing Skyline to analyze lipidomics data containing liquid chromatography, ion mobility spectrometry and mass spectrometry dimensions

KI Kirkwood, BS Pratt, N Shulman, K Tamura… - Nature protocols, 2022 - nature.com
Lipidomics studies suffer from analytical and annotation challenges because of the great
structural similarity of many of the lipid species. To improve lipid characterization and …

Targeting the ASMase/S1P pathway protects from sortilin-evoked vascular damage in hypertension

P Di Pietro, A Carrizzo, E Sommella… - The Journal of …, 2022 - Am Soc Clin Investig
Sortilin has been positively correlated with vascular disorders in humans. No study has yet
evaluated the possible direct effect of sortilin on vascular function. We used pharmacological …

Yeast Svf1 binds ceramides and contributes to sphingolipid metabolism at the ER cis-Golgi interface

S Limar, C Körner, F Martínez-Montañés… - Journal of Cell …, 2023 - rupress.org
Ceramides are essential precursors of complex sphingolipids and act as potent signaling
molecules. Ceramides are synthesized in the endoplasmic reticulum (ER) and receive their …

Development and application of multidimensional lipid libraries to investigate lipidomic dysregulation related to smoke inhalation injury severity

KI Kirkwood, MW Christopher, JL Burgess… - Journal of proteome …, 2021 - ACS Publications
The implication of lipid dysregulation in diseases, toxic exposure outcomes, and
inflammation has brought great interest to lipidomic studies. However, lipids have proven to …

Combining native mass spectrometry and lipidomics to uncover specific membrane protein–lipid interactions from natural lipid sources

Y Zhu, MT Odenkirk, P Qiao, T Zhang, S Schrecke… - Chemical …, 2023 - pubs.rsc.org
While it is known that lipids play an essential role in regulating membrane protein structure
and function, it remains challenging to identify specific protein–lipid interactions. Here, we …

Critical shifts in lipid metabolism promote megakaryocyte differentiation and proplatelet formation

B de Jonckheere, F Kollotzek, P Münzer… - Nature cardiovascular …, 2023 - nature.com
During megakaryopoiesis, megakaryocytes (MKs) undergo cellular morphological changes
with strong modification of membrane composition and lipid signaling. Here, we adopt a lipid …

Inferring a causal relationship between ceramide levels and COVID-19 respiratory distress

MM Khodadoust - Scientific Reports, 2021 - nature.com
A causal relationship between plasma ceramide concentration and respiratory distress
symptoms in COVID-19 patients is inferred. In this study, plasma samples of 52 individuals …