Generating specificity in genome regulation through transcription factor sensitivity to chromatin
Cell type-specific gene expression relies on transcription factors (TFs) binding DNA
sequence motifs embedded in chromatin. Understanding how motifs are accessed in …
sequence motifs embedded in chromatin. Understanding how motifs are accessed in …
Energy-driven genome regulation by ATP-dependent chromatin remodellers
The packaging of DNA into chromatin in eukaryotes regulates gene transcription, DNA
replication and DNA repair. ATP-dependent chromatin remodelling enzymes (re) arrange …
replication and DNA repair. ATP-dependent chromatin remodelling enzymes (re) arrange …
Structures of transcription preinitiation complex engaged with the+ 1 nucleosome
The preinitiation complex (PIC) assembles on promoters of protein-coding genes to position
RNA polymerase II (Pol II) for transcription initiation. Previous structural studies revealed the …
RNA polymerase II (Pol II) for transcription initiation. Previous structural studies revealed the …
Structure of SWI/SNF chromatin remodeller RSC bound to a nucleosome
FR Wagner, C Dienemann, H Wang, A Stützer… - Nature, 2020 - nature.com
Chromatin-remodelling complexes of the SWI/SNF family function in the formation of
nucleosome-depleted, transcriptionally active promoter regions (NDRs),. In the yeast …
nucleosome-depleted, transcriptionally active promoter regions (NDRs),. In the yeast …
Beads on a string—nucleosome array arrangements and folding of the chromatin fiber
Understanding how the genome is structurally organized as chromatin is essential for
understanding its function. Here, we review recent developments that allowed the …
understanding its function. Here, we review recent developments that allowed the …
Spatiotemporal coordination of transcription preinitiation complex assembly in live cells
Transcription initiation by RNA polymerase II (RNA Pol II) requires preinitiation complex
(PIC) assembly at gene promoters. In the dynamic nucleus, where thousands of promoters …
(PIC) assembly at gene promoters. In the dynamic nucleus, where thousands of promoters …
Opposing chromatin remodelers control transcription initiation frequency and start site selection
Precise nucleosome organization at eukaryotic promoters is thought to be generated by
multiple chromatin remodeler (CR) enzymes and to affect transcription initiation. Using an …
multiple chromatin remodeler (CR) enzymes and to affect transcription initiation. Using an …
RSC-associated subnucleosomes define MNase-sensitive promoters in yeast
S Brahma, S Henikoff - Molecular cell, 2019 - cell.com
The classic view of nucleosome organization at active promoters is that two well-positioned
nucleosomes flank a nucleosome-depleted region (NDR). However, this view has been …
nucleosomes flank a nucleosome-depleted region (NDR). However, this view has been …
Old cogs, new tricks: the evolution of gene expression in a chromatin context
Sophisticated gene-regulatory mechanisms probably evolved in prokaryotes billions of
years before the emergence of modern eukaryotes, which inherited the same basic …
years before the emergence of modern eukaryotes, which inherited the same basic …
Epigenome regulation by dynamic nucleosome unwrapping
S Brahma, S Henikoff - Trends in biochemical sciences, 2020 - cell.com
Gene regulation in eukaryotes requires the controlled access of sequence-specific
transcription factors (TFs) to their sites in a chromatin landscape dominated by …
transcription factors (TFs) to their sites in a chromatin landscape dominated by …