The application of QM/MM simulations in heterogeneous catalysis

GA Bramley, OT Beynon, PV Stishenko… - Physical Chemistry …, 2023 - pubs.rsc.org
The QM/MM simulation method is provenly efficient for the simulation of biological systems,
where an interplay of extensive environment and delicate local interactions drives a process …

Toward the Integration of Machine Learning and Molecular Modeling for Designing Drug Delivery Nanocarriers

XJ Gao, K Ciura, Y Ma, A Mikolajczyk… - Advanced …, 2024 - Wiley Online Library
The pioneering work on liposomes in the 1960s and subsequent research in controlled drug
release systems significantly advances the development of nanocarriers (NCs) for drug …

Molecular dynamics simulations of cRGD-conjugated PEGylated TiO2 nanoparticles for targeted photodynamic therapy

P Siani, G Frigerio, E Donadoni… - Journal of Colloid and …, 2022 - Elsevier
The conjugation of high-affinity cRGD-containing peptides is a promising approach in
nanomedicine to efficiently reduce off-targeting effects and enhance the cellular uptake by …

Effect of dopamine-functionalization, charge and pH on protein corona formation around TiO 2 nanoparticles

P Siani, C Di Valentin - Nanoscale, 2022 - pubs.rsc.org
Inorganic nanoparticles (NPs) are gaining increasing attention in nanomedicine because of
their stimuli responsiveness, which allows combining therapy with diagnosis. However, little …

Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells

E Donadoni, G Frigerio, P Siani, S Motta… - ACS Biomaterials …, 2023 - ACS Publications
Atomistic details on the mechanism of targeting activity by biomedical nanodevices of
specific receptors are still scarce in the literature, where mostly ligand/receptor pairs are …

Mechanism of RGD-conjugated nanodevice binding to its target protein integrin α V β 3 by atomistic molecular dynamics and machine learning

G Frigerio, E Donadoni, P Siani, J Vertemara, S Motta… - Nanoscale, 2024 - pubs.rsc.org
Active targeting strategies have been proposed to enhance the selective uptake of
nanoparticles (NPs) by diseased cells, and recent experimental findings have proven the …

[HTML][HTML] Nature of TiO2–oligonucleotides interactions by atomistic molecular dynamics simulations

FA Soria, P Siani, C Di Valentin - Surfaces and Interfaces, 2024 - Elsevier
We used molecular dynamics simulations to investigate the adsorption behavior of single-
stranded deoxyribonucleic acid (ssDNA) segments on the anatase (101) surface. Four …

Exploring the drug loading mechanism of photoactive inorganic nanocarriers through molecular dynamics simulations

S Motta, P Siani, A Levy, C Di Valentin - Nanoscale, 2021 - pubs.rsc.org
Inorganic nanoparticles are gaining increasing attention as drug carriers because they
respond to external physical stimuli, allowing therapy to be combined with diagnosis. Their …

[PDF][PDF] Surfaces and Interfaces

FA Soria, P Siani, C Di Valentin - researchgate.net
We used molecular dynamics simulations to investigate the adsorption behavior of single-
stranded deoxyribonucleic acid (ssDNA) segments on the anatase (101) surface. Four …