Microbial assembly, interaction, functioning, activity and diversification: a review derived from community compositional data
Microorganisms play crucial roles in maintaining ecosystem stability. The last two decades
have witnessed an upsurge in studies on marine microbial community composition using …
have witnessed an upsurge in studies on marine microbial community composition using …
Functional microbiome strategies for the bioremediation of petroleum-hydrocarbon and heavy metal contaminated soils: a review
Petroleum hydrocarbons and heavy metals are the two major soil contaminants that are
released into the environment in the forms of industrial effluents. These contaminants exert …
released into the environment in the forms of industrial effluents. These contaminants exert …
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea… - Nucleic acids …, 2020 - academic.oup.com
Abstract MGnify (http://www. ebi. ac. uk/metagenomics) provides a free to use platform for the
assembly, analysis and archiving of microbiome data derived from sequencing microbial …
assembly, analysis and archiving of microbiome data derived from sequencing microbial …
Microbiomes in the Challenger Deep slope and bottom-axis sediments
YL Zhou, P Mara, GJ Cui, VP Edgcomb… - Nature communications, 2022 - nature.com
Hadal trenches are the deepest and most remote regions of the ocean. The 11-kilometer
deep Challenger Deep is the least explored due to the technical challenges of sampling …
deep Challenger Deep is the least explored due to the technical challenges of sampling …
Automated analysis of genomic sequences facilitates high-throughput and comprehensive description of bacteria
The study of microbial communities is hampered by the large fraction of still unknown
bacteria. However, many of these species have been isolated, yet lack a validly published …
bacteria. However, many of these species have been isolated, yet lack a validly published …
Bacteria are important dimethylsulfoniopropionate producers in marine aphotic and high-pressure environments
Y Zheng, J Wang, S Zhou, Y Zhang, J Liu… - Nature …, 2020 - nature.com
Dimethylsulfoniopropionate (DMSP) is an important marine osmolyte. Aphotic environments
are only recently being considered as potential contributors to global DMSP production …
are only recently being considered as potential contributors to global DMSP production …
Abiotic selection of microbial genome size in the global ocean
Strong purifying selection is considered a major evolutionary force behind small microbial
genomes in the resource-poor photic ocean. However, very little is currently known about …
genomes in the resource-poor photic ocean. However, very little is currently known about …
Marine hydrocarbon-degrading bacteria breakdown poly (ethylene terephthalate)(PET)
Pollution of aquatic ecosystems by plastic wastes poses severe environmental and health
problems and has prompted scientific investigations on the fate and factors contributing to …
problems and has prompted scientific investigations on the fate and factors contributing to …
Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics
Abstract Background The Arctic and Antarctic are the two most geographically distant
bioregions on earth. Recent sampling efforts and following metagenomics have shed light …
bioregions on earth. Recent sampling efforts and following metagenomics have shed light …
Microbial life on the surface of microplastics in natural waters
Major water-polluting microplastics (for example, polyethylene, polypropylene and others)
have lower density than water. Therefore, they are concentrated in the neustonic layer near …
have lower density than water. Therefore, they are concentrated in the neustonic layer near …