DNA metabarcoding in diet studies: Unveiling ecological aspects in aquatic and terrestrial ecosystems

LL de Sousa, SM Silva, R Xavier - Environmental DNA, 2019 - Wiley Online Library
Effective conservation of species and ecosystems requires the understanding of important
ecological traits, such as dietary habits, food webs, and trophic niches. In diet studies, the …

Methodological trends and perspectives of animal dietary studies by noninvasive fecal DNA metabarcoding

H Ando, H Mukai, T Komura, T Dewi… - Environmental …, 2020 - Wiley Online Library
Fine‐scale estimation of trophic interactions is an important subject in the field of ecology.
Diet analysis based on fecal DNA metabarcoding has been accepted as a noninvasive …

Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?

BE Deagle, AC Thomas, JC McInnes… - Molecular …, 2019 - Wiley Online Library
Advances in DNA sequencing technology have revolutionized the field of molecular analysis
of trophic interactions, and it is now possible to recover counts of food DNA sequences from …

A paradigm shift in the trophic importance of jellyfish?

GC Hays, TK Doyle, JDR Houghton - Trends in ecology & evolution, 2018 - cell.com
The past 30 years have seen several paradigm shifts in our understanding of how ocean
ecosystems function. Now recent technological advances add to an overwhelming body of …

[HTML][HTML] Seabirds, gyres and global trends in plastic pollution

JA Van Franeker, KL Law - Environmental pollution, 2015 - Elsevier
Fulmars are effective biological indicators of the abundance of floating plastic marine debris.
Long-term data reveal high plastic abundance in the southern North Sea, gradually …

Maximizing fish detection with eDNA metabarcoding

C Bessey, SN Jarman, O Berry, YS Olsen… - Environmental …, 2020 - Wiley Online Library
Fish biodiversity can be measured by capturing and then sequencing free DNA present in
water. Such environmental DNA (eDNA) methods offer an effective, noninvasive tool for …

Genetic and genomic monitoring with minimally invasive sampling methods

EL Carroll, MW Bruford, JA DeWoody… - Evolutionary …, 2018 - Wiley Online Library
The decreasing cost and increasing scope and power of emerging genomic technologies
are reshaping the field of molecular ecology. However, many modern genomic approaches …

Effect of marker choice and thermal cycling protocol on zooplankton DNA metabarcoding studies

LJ Clarke, JM Beard, KM Swadling… - Ecology and …, 2017 - Wiley Online Library
DNA metabarcoding is a promising approach for rapidly surveying biodiversity and is likely
to become an important tool for measuring ecosystem responses to environmental change …

Current methods and future directions in avian diet analysis

BD Hoenig, AM Snider, AM Forsman, KA Hobson… - The Auk, 2022 - academic.oup.com
Identifying the composition of avian diets is a critical step in characterizing the roles of birds
within ecosystems. However, because birds are a diverse taxonomic group with equally …

Advancing the integration of multi‐marker metabarcoding data in dietary analysis of trophic generalists

LP da Silva, VA Mata, PB Lopes… - Molecular Ecology …, 2019 - Wiley Online Library
The application of DNA metabarcoding to dietary analysis of trophic generalists requires
using multiple markers in order to overcome problems of primer specificity and bias …