The how and why of lncRNA function: an innate immune perspective
EK Robinson, S Covarrubias, S Carpenter - Biochimica et Biophysica Acta …, 2020 - Elsevier
Next-generation sequencing has provided a more complete picture of the composition of the
human transcriptome indicating that much of the “blueprint” is a vastness of poorly …
human transcriptome indicating that much of the “blueprint” is a vastness of poorly …
MicroRNA and transcription factor: key players in plant regulatory network
AFA Samad, M Sajad, N Nazaruddin, IA Fauzi… - Frontiers in plant …, 2017 - frontiersin.org
Recent achievements in plant microRNA (miRNA), a large class of small and non-coding
RNAs, are very exciting. A wide array of techniques involving forward genetic, molecular …
RNAs, are very exciting. A wide array of techniques involving forward genetic, molecular …
Evolutionary constraint and innovation across hundreds of placental mammals
Zoonomia is the largest comparative genomics resource for mammals produced to date. By
aligning genomes for 240 species, we identify bases that, when mutated, are likely to affect …
aligning genomes for 240 species, we identify bases that, when mutated, are likely to affect …
HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis
IV Kulakovskiy, IE Vorontsov, IS Yevshin… - Nucleic acids …, 2018 - academic.oup.com
We present a major update of the HOCOMOCO collection that consists of patterns
describing DNA binding specificities for human and mouse transcription factors. In this …
describing DNA binding specificities for human and mouse transcription factors. In this …
[HTML][HTML] CiiiDER: A tool for predicting and analysing transcription factor binding sites
The availability of large amounts of high-throughput genomic, transcriptomic and
epigenomic data has provided opportunity to understand regulation of the cellular …
epigenomic data has provided opportunity to understand regulation of the cellular …
Combined Analysis of the Fruit Metabolome and Transcriptome Reveals Candidate Genes Involved in Flavonoid Biosynthesis in Actinidia arguta
Y Li, J Fang, X Qi, M Lin, Y Zhong, L Sun… - International journal of …, 2018 - mdpi.com
To assess the interrelation between the change of metabolites and the change of fruit color,
we performed a combined metabolome and transcriptome analysis of the flesh in two …
we performed a combined metabolome and transcriptome analysis of the flesh in two …
The forkhead-box family of transcription factors: key molecular players in colorectal cancer pathogenesis
P Laissue - Molecular cancer, 2019 - Springer
Colorectal cancer (CRC) is the third most commonly occurring cancer worldwide and the
fourth most frequent cause of death having an oncological origin. It has been found that …
fourth most frequent cause of death having an oncological origin. It has been found that …
Genomic repeats categorize genes with distinct functions for orchestrated regulation
Repetitive elements are abundantly distributed in mammalian genomes. Here, we reveal a
striking association between repeat subtypes and gene function. SINE, L1, and low …
striking association between repeat subtypes and gene function. SINE, L1, and low …
Stress induced aging in mouse eye
Aging, a universal process that affects all cells in an organism, is a major risk factor for a
group of neuropathies called glaucoma, where elevated intraocular pressure is one of the …
group of neuropathies called glaucoma, where elevated intraocular pressure is one of the …
PWM2Vec: An efficient embedding approach for viral host specification from coronavirus spike sequences
Simple Summary The family of coronaviruses comprises a diverse set of strains and variants
which cause diseases from the common cold to COVID-19. Moreover, they infect a wide …
which cause diseases from the common cold to COVID-19. Moreover, they infect a wide …