[HTML][HTML] Recent advances in activity-based probes (ABPs) and affinity-based probes (A f BPs) for profiling of enzymes

H Fang, B Peng, SY Ong, Q Wu, L Li, SQ Yao - Chemical Science, 2021 - pubs.rsc.org
Activity-based protein profiling (ABPP) is a technique that uses highly selective active-site
targeted chemical probes to label and monitor the state of proteins. ABPP integrates the …

Recent advances in chemical protein synthesis: method developments and biological applications

S Dong, JS Zheng, Y Li, H Wang, G Chen… - Science China …, 2024 - Springer
The central dogma of modern biology underscores the pivotal roles proteins play in diverse
biological processes, the study of which necessitates advanced methods to produce …

Chemical synthesis of activity‐based E2‐ubiquitin probes for the structural analysis of E3 ligase‐catalyzed transthiolation

LJ Liang, GC Chu, Q Qu, C Zuo, J Mao… - Angewandte Chemie …, 2021 - Wiley Online Library
Activity‐based E2 conjugating enzyme (E2)‐ubiquitin (Ub) probes have recently emerged as
effective tools for studying the molecular mechanism of E3 ligase (E3)‐catalyzed …

Chemically induced vinylphosphonothiolate electrophiles for thiol–thiol bioconjugations

AL Baumann, S Schwagerus, K Broi… - Journal of the …, 2020 - ACS Publications
Herein we introduce vinylphosphonothiolates as a new class of cysteine-selective
electrophiles for protein labeling and the formation of stable protein–protein conjugates. We …

[HTML][HTML] Development and application of ubiquitin-based chemical probes

X Sui, Y Wang, YX Du, LJ Liang, Q Zheng, YM Li… - Chemical …, 2020 - pubs.rsc.org
Protein ubiquitination regulates almost every process in eukaryotic cells. The study of the
many enzymes involved in the ubiquitination system and the development of ubiquitination …

The journey for the total chemical synthesis of a 53 kDa protein

H Sun, A Brik - Accounts of Chemical Research, 2019 - ACS Publications
Conspectus Chemical protein synthesis has been proved as an efficient way to afford
medium-sized proteins with high homogeneity in workable quantities for various …

Cell-permeable activity-based ubiquitin probes enable intracellular profiling of human deubiquitinases

W Gui, CA Ott, K Yang, JS Chung, S Shen… - Journal of the …, 2018 - ACS Publications
Advancement in our knowledge of deubiquitinases (DUBs) and their biological functions
requires biochemical tools permitting interrogation of DUB activities under physiologically …

Palladium‐Mediated Cleavage of Proteins with Thiazolidine‐Modified Backbone in Live Cells

G Mann, G Satish, R Meledin, GB Vamisetti… - Angewandte …, 2019 - Wiley Online Library
Chemical protein synthesis and biorthogonal modification chemistries allow production of
unique proteins for a range of biological studies. Bond‐forming reactions for site‐selective …

Protein engineering in the ubiquitin system: tools for discovery and beyond

B Zhao, YC Tsai, B Jin, B Wang, Y Wang, H Zhou… - Pharmacological …, 2020 - ASPET
Ubiquitin (UB) transfer cascades consisting of E1, E2, and E3 enzymes constitute a complex
network that regulates a myriad of biologic processes by modifying protein substrates …

Photocaging of Activity‐Based Ubiquitin Probes via a C‐Terminal Backbone Modification Strategy

Y Wang, J Chen, X Hua, X Meng, H Cai… - Angewandte …, 2022 - Wiley Online Library
Photocaged, activity‐based ubiquitin (Ub) probes (Ub‐ABPs) have been developed for the
time‐resolved probing of deubiquitinating enzyme (DUB) activities, but many Ub‐ABPs are …