Metagenomics approaches in systems microbiology

JM Vieites, ME Guazzaroni, A Beloqui… - FEMS microbiology …, 2008 - academic.oup.com
The world of microorganisms comprises a vast diversity of live organisms, each with its
individual set of genes, cellular components and metabolic reactions that interact within the …

Genomic and proteomic biomarkers for cancer: a multitude of opportunities

MA Tainsky - Biochimica et Biophysica Acta (BBA)-Reviews on …, 2009 - Elsevier
Biomarkers are molecular indicators of a biological status, and as biochemical species can
be assayed to evaluate the presence of cancer and therapeutic interventions. Through a …

Demosponge EST sequencing reveals a complex genetic toolkit of the simplest metazoans

M Harcet, M Roller, H Ćetković, D Perina… - Molecular biology …, 2010 - academic.oup.com
Sponges (Porifera) are among the simplest living and the earliest branching metazoans.
They hold a pivotal role for studying genome evolution of the entire metazoan branch, both …

Interplay of metagenomics and in vitro compartmentalization

M Ferrer, A Beloqui, JM Vieites… - Microbial …, 2009 - Wiley Online Library
In recent years, the application of approaches for harvesting DNA from the environment, the
so‐called,'metagenomic approaches' has proven to be highly successful for the …

Dominant processes during human dendritic cell maturation revealed by integration of proteome and transcriptome at the pathway level

SI Buschow, E Lasonder… - Journal of proteome …, 2010 - ACS Publications
Gene expression is commonly used to study the activation of dendritic cells (DCs) to identify
proteins that determine whether these cells induce an immunostimulatory or tolerogenic …

Using pathway signatures as means of identifying similarities among microarray experiments

L Beltrame, L Rizzetto, R Paola, P Rocca-Serra… - PLoS …, 2009 - journals.plos.org
Widespread use of microarrays has generated large amounts of data, the interrogation of the
public microarray repositories, identifying similarities between microarray experiments is …

[PDF][PDF] Applications of SELDI-TOF technology in cancer biomarkers discovery

ID Popescu, R Albulescu, E Raducan… - Romanian …, 2010 - academia.edu
Cancers represent a major class of morbidity and the primary cause of death in the segment
of active population. Improvement of therapeutically outcomes depends on more precise …

MikroRNA veri tabanlarında bil getir-getirimi

K Açıcı - 2015 - acikerisim.baskent.edu.tr
Büyük ve açık veri tabanlarında bulunan biyolojik deneylerin içerik tabanlı geri getirimi
biyoenformatik ve hesaplamalı biyolojide güncel bir problemdir. Ġçerik-tabanlı getirimde …

Getting Started in Biological Pathway Construction

RA Sealfon, SC Sealfon - Systems Biology for Signaling Networks, 2010 - Springer
The increasingly extensive data on dynamic cellular processes are revolutionizing biology
and medicine. Computational tools are necessary for exploring these data. A familiar and …

Oncology Biomarkers

MA Tainsky - General, Applied and Systems Toxicology, 2009 - Wiley Online Library
Biomarkers hold tremendous promise for diagnostic devices and are useful for monitoring
the effectiveness of clinical interventions. Biomarkers are also used to stratify oncology …