Applying next-generation sequencing to track falciparum malaria in sub-Saharan Africa
Next-generation sequencing (NGS) technologies are increasingly being used to address a
diverse range of biological and epidemiological questions. The current understanding of …
diverse range of biological and epidemiological questions. The current understanding of …
Using parasite genetic and human mobility data to infer local and cross-border malaria connectivity in Southern Africa
Local and cross-border importation remain major challenges to malaria elimination and are
difficult to measure using traditional surveillance data. To address this challenge, we …
difficult to measure using traditional surveillance data. To address this challenge, we …
Dcifer: an IBD-based method to calculate genetic distance between polyclonal infections
I Gerlovina, B Gerlovin, I Rodríguez-Barraquer… - Genetics, 2022 - academic.oup.com
An essential step toward reconstructing pathogen transmission and answering
epidemiologically relevant questions from genomic data is obtaining pairwise genetic …
epidemiologically relevant questions from genomic data is obtaining pairwise genetic …
Strengthening surveillance systems for malaria elimination by integrating molecular and genomic data
C Nsanzabana - Tropical medicine and infectious disease, 2019 - mdpi.com
Unprecedented efforts in malaria control over the last 15 years have led to a substantial
decrease in both morbidity and mortality in most endemic settings. However, these …
decrease in both morbidity and mortality in most endemic settings. However, these …
High Genetic Diversity of Plasmodium falciparum in the Low-Transmission Setting of the Kingdom of Eswatini
Background To better understand transmission dynamics, we characterized Plasmodium
falciparum genetic diversity in Eswatini, where transmission is low and sustained by …
falciparum genetic diversity in Eswatini, where transmission is low and sustained by …
[HTML][HTML] Scientific findings of the Southern and Central Africa International Center of Excellence for Malaria Research: ten years of malaria control impact assessments …
MM Ippolito, ME Gebhardt, E Ferriss… - The American Journal …, 2022 - ncbi.nlm.nih.gov
For a decade, the Southern and Central Africa International Center of Excellence for Malaria
Research has operated with local partners across study sites in Zambia and Zimbabwe that …
Research has operated with local partners across study sites in Zambia and Zimbabwe that …
Genomics reveals heterogeneous Plasmodium falciparum transmission and selection signals in Zambia
Background Genomic surveillance is crucial for monitoring malaria transmission and
understanding parasite adaptation to interventions. Zambia lacks prior nationwide efforts in …
understanding parasite adaptation to interventions. Zambia lacks prior nationwide efforts in …
Plasmodium falciparum importation does not sustain malaria transmission in a semi-arid region of Kenya
CF Markwalter, D Menya, A Wesolowski… - PLOS global public …, 2022 - journals.plos.org
Human movement impacts the spread and transmission of infectious diseases. Recently, a
large reservoir of Plasmodium falciparum malaria was identified in a semi-arid region of …
large reservoir of Plasmodium falciparum malaria was identified in a semi-arid region of …
Defining malaria parasite population subdivisions, transmission dynamics and infection origins using SNP barcodes
The successful implementation of pathogen genomic surveillance demands rapid, low-cost
genotyping solutions for tracking infections. Here we demonstrate the capacity of single …
genotyping solutions for tracking infections. Here we demonstrate the capacity of single …
[HTML][HTML] Sustained malaria transmission despite reactive screen-and-treat in a low-transmission area of southern Zambia
KM Searle, B Katowa, M Musonda… - The American Journal …, 2021 - ncbi.nlm.nih.gov
Malaria elimination strategies are designed to more effectively identify and treat infected
individuals to interrupt transmission. One strategy, reactive screen-and-treat, starts with …
individuals to interrupt transmission. One strategy, reactive screen-and-treat, starts with …