Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

TE Cruickshank, MW Hahn - Molecular ecology, 2014 - Wiley Online Library
The metaphor of 'genomic islands of speciation'was first used to describe heterogeneous
differentiation among loci between the genomes of closely related species. The biological …

Genomic signatures of selection at linked sites: unifying the disparity among species

AD Cutter, BA Payseur - Nature Reviews Genetics, 2013 - nature.com
Population genetics theory supplies powerful predictions about how natural selection
interacts with genetic linkage to sculpt the genomic landscape of nucleotide polymorphism …

The Many Landscapes of Recombination in Drosophila melanogaster

JM Comeron, R Ratnappan, S Bailin - 2012 - journals.plos.org
Recombination is a fundamental biological process with profound evolutionary implications.
Theory predicts that recombination increases the effectiveness of selection in natural …

Genome-Wide Fine-Scale Recombination Rate Variation in Drosophila melanogaster

AH Chan, PA Jenkins, YS Song - PLoS genetics, 2012 - journals.plos.org
Estimating fine-scale recombination maps of Drosophila from population genomic data is a
challenging problem, in particular because of the high background recombination rate. In …

The effects of deleterious mutations on evolution at linked sites

B Charlesworth - Genetics, 2012 - academic.oup.com
The process of evolution at a given site in the genome can be influenced by the action of
selection at other sites, especially when these are closely linked to it. Such selection …

Pervasive Natural Selection in the Drosophila Genome?

G Sella, DA Petrov, M Przeworski, P Andolfatto - PLoS genetics, 2009 - journals.plos.org
Over the past four decades, the predominant view of molecular evolution saw little
connection between natural selection and genome evolution, assuming that the functionally …

The determinants of genetic diversity in butterflies

A Mackintosh, DR Laetsch, A Hayward… - Nature …, 2019 - nature.com
Under the neutral theory, genetic diversity is expected to increase with population size.
While comparative analyses have consistently failed to find strong relationships between …

Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes

PA Hohenlohe, S Bassham… - … Transactions of the …, 2012 - royalsocietypublishing.org
Population genomic studies are beginning to provide a more comprehensive view of
dynamic genome-scale processes in evolution. Patterns of genomic architecture, such as …

Reverse engineering the genotype–phenotype map with natural genetic variation

MV Rockman - Nature, 2008 - nature.com
The genetic variation that occurs naturally in a population is a powerful resource for studying
how genotype affects phenotype. Each allele is a perturbation of the biological system, and …

Recombination rate variation in closely related species

CS Smukowski, MAF Noor - Heredity, 2011 - nature.com
Despite their importance to successful meiosis and various evolutionary processes, meiotic
recombination rates sometimes vary within species or between closely related species. For …