CATH: an expanded resource to predict protein function through structure and sequence

NL Dawson, TE Lewis, S Das, JG Lees… - Nucleic acids …, 2017 - academic.oup.com
The latest version of the CATH-Gene3D protein structure classification database has
recently been released (version 4.1, http://www. cathdb. info). The resource comprises over …

Compatibility between text mining and qualitative research in the perspectives of grounded theory, content analysis, and reliability.

CH Yu, A Jannasch-Pennell, S DiGangi - Qualitative Report, 2011 - ERIC
The objective of this article is to illustrate that text mining and qualitative research are
epistemologically compatible. First, like many qualitative research approaches, such as …

A review of protein function prediction under machine learning perspective

J S. Bernardes - Recent patents on biotechnology, 2013 - benthamdirect.com
Protein function prediction is one of the most challenging problems in the post-genomic era.
The number of newly identified proteins has been exponentially increasing with the …

Biomedical text mining and its applications

R Rodriguez-Esteban - PLoS computational biology, 2009 - journals.plos.org
This tutorial is intended for biologists and computational biologists interested in adding text
mining tools to their bioinformatics toolbox. As an illustrative example, the tutorial examines …

A survey on text classification and its applications

X Zhou, R Gururajan, Y Li, R Venkataraman… - Web …, 2020 - content.iospress.com
Text classification (aka text categorisation) is an effective and efficient technology for
information organisation and management. With the explosion of information resources on …

[HTML][HTML] Classificaçao automática de textos por meio de aprendizado de máquina baseado em redes

RG Rossi - 2015 - bdtd.ibict.br
Nos dias atuais há uma quantidade massiva de dados textuais sendo produzida e
armazenada diariamente na forma de e-mails, relatórios, artigos e postagens em redes …

Text mining improves prediction of protein functional sites

KM Verspoor, JD Cohn, KE Ravikumar, ME Wall - PloS one, 2012 - journals.plos.org
We present an approach that integrates protein structure analysis and text mining for protein
functional site prediction, called LEAP-FS (Literature Enhanced Automated Prediction of …

Constructing genetic networks using biomedical literature and rare event classification

A Al-Aamri, K Taha, Y Al-Hammadi, M Maalouf… - Scientific reports, 2017 - nature.com
Text mining has become an important tool in bioinformatics research with the massive
growth in the biomedical literature over the past decade. Mining the biomedical literature …

The functional genomics network in the evolution of biological text mining over the past decade

C Blaschke, A Valencia - New biotechnology, 2013 - Elsevier
Different programs of The European Science Foundation (ESF) have contributed
significantly to connect researchers in Europe and beyond through several initiatives. This …

BICEPP: an example-based statistical text mining method for predicting the binary characteristics of drugs

FPY Lin, S Anthony, TM Polasek, G Tsafnat… - BMC …, 2011 - Springer
Background The identification of drug characteristics is a clinically important task, but it
requires much expert knowledge and consumes substantial resources. We have developed …