Microbiome-aware ecotoxicology of organisms: relevance, pitfalls, and challenges

S Duperron, S Halary, A Gallet, B Marie - Frontiers in Public Health, 2020 - frontiersin.org
Over the last 15 years, the advent of high-throughput “omics” techniques has revealed the
multiple roles and interactions occurring among hosts, their microbial partners and their …

Genome Investigation and Functional Annotation of Lactiplantibacillus plantarum YW11 Revealing Streptin and Ruminococcin-A as Potent Nutritive Bacteriocins …

T Aziz, M Naveed, SI Makhdoom, U Ali, MS Mughal… - Molecules, 2023 - mdpi.com
All nutrient-rich feed and food environments, as well as animal and human mucosae,
include lactic acid bacteria known as Lactobacillus plantarum. This study reveals an …

Functional Annotation of Lactiplantibacillus plantarum 13-3 as a Potential Starter Probiotic Involved in the Food Safety of Fermented Products

T Aziz, M Naveed, A Sarwar, SI Makhdoom, MS Mughal… - Molecules, 2022 - mdpi.com
The important role of Lactiplantibacillus plantarum strains in improving the human mucosal
and systemic immunity, preventing non-steroidal anti-provocative drug-induced reduction in …

Bio-Molecular analysis of selected food derived Lactiplantibacillus strains for CLA production reveals possibly a complex mechanism

T Aziz, A Sarwar, M Naveed, M Shahzad… - Food Research …, 2022 - Elsevier
Lactiplantibacillus is among the most extensively studied bacterial specie belonging to the
genus Lactobacillus with proven probiotic and health promoting effects. These beneficial …

Development of an absolute quantification method for ribosomal RNA gene copy numbers per eukaryotic single cell by digital PCR

K Yarimizu, S Sildever, Y Hamamoto, S Tazawa… - Harmful Algae, 2021 - Elsevier
Abstract Recent increase of Harmful Algal Blooms (HAB) causes world-wide ecological,
economical, and health issues, and more attention is paid to frequent coastal monitoring for …

Comparative genomics of food-derived probiotic Lactiplantibacillus plantarum K25 reveals its hidden potential, compactness, and efficiency

T Aziz, M Naveed, MA Shabbir, A Sarwar… - Frontiers in …, 2023 - frontiersin.org
This study aimed to investigate the intricate genetic makeup of the Lactiplantibacillus
plantarum K25 strain by conducting a comprehensive analysis of comparative genomics …

Environmental factors affecting chytrid (Chytridiomycota) infection rates on Planktothrix agardhii

KM McKindles, MA Manes, RM McKay… - Journal of Plankton …, 2021 - academic.oup.com
Planktothrix agardhii dominates the cyanobacterial harmful algal bloom biomass in
Sandusky Bay, Lake Erie (USA) from May until September. This filamentous cyanobacterium …

Genomic comparison of Planktothrix agardhii isolates from a Lake Erie embayment

KM McKindles, RM McKay, GS Bullerjahn - PloS one, 2022 - journals.plos.org
Planktothrix agardhii is a filamentous cyanobacterial species that dominates harmful algal
blooms in Sandusky Bay, Lake Erie and other freshwater basins across the world. P …

Interactions between chytrids cause variable infection strategies on harmful algal bloom forming species

KM McKindles, RML McKay, GS Bullerjahn, T Frenken - Harmful Algae, 2023 - Elsevier
Cyanobacteria have a great diversity of natural enemies, such as herbivores and pathogens,
including fungal pathogens within the Chytridiomycota (chytrids). While these pathogens …

Microfluidics and nanoparticles based amperometric biosensor for the detection of cyanobacteria (Planktothrix agardhii NIVA-CYA 116) DNA

Z Ölcer, E Esen, A Ersoy, S Budak, DS Kaya… - Biosensors and …, 2015 - Elsevier
Some of the cyanobacteria produce protease inhibitor oligopeptides such as cyanopeptolins
and cause drinking water contamination; hence, their detection has great importance to …