Biochemical systems theory: a review
EO Voit - International Scholarly Research Notices, 2013 - Wiley Online Library
Biochemical systems theory (BST) is the foundation for a set of analytical andmodeling tools
that facilitate the analysis of dynamic biological systems. This paper depicts major …
that facilitate the analysis of dynamic biological systems. This paper depicts major …
Simulation of prokaryotic genetic circuits
HH McAdams, A Arkin - Annual review of biophysics and …, 1998 - annualreviews.org
▪ Abstract Biochemical and genetic approaches have identified the molecular mechanisms
of many genetic reactions, particularly in bacteria. Now a comparably detailed …
of many genetic reactions, particularly in bacteria. Now a comparably detailed …
[图书][B] The regulation of cellular systems
R Heinrich, S Schuster - 2012 - books.google.com
There is no doubt that nowadays, biology benefits greatly from mathematics. In particular,
cellular biology is, besides population dynamics, a field where tech niques of mathematical …
cellular biology is, besides population dynamics, a field where tech niques of mathematical …
Metabolism of citric acid production by Aspergillus niger: Model definition, steady‐state analysis and constrained optimization of citric acid production rate
F Alvarez‐Vasquez, C González‐Alcón… - Biotechnology and …, 2000 - Wiley Online Library
In an attempt to provide a rational basis for the optimization of citric acid production by A.
niger, we developed a mathematical model of the metabolism of this filamentous fungus …
niger, we developed a mathematical model of the metabolism of this filamentous fungus …
The secant condition for instability in biochemical feedback control—I. The role of cooperativity and saturability
CD Thron - Bulletin of Mathematical Biology, 1991 - Elsevier
This paper concerns oscillations arising in a sequence of biochemical reactions S 0→ S
1↓→ S 2↓→⋯→ S n→ whose end-product inhibits the rate of the first reaction. Except for …
1↓→ S 2↓→⋯→ S n→ whose end-product inhibits the rate of the first reaction. Except for …
The best models of metabolism
EO Voit - Wiley Interdisciplinary Reviews: Systems Biology and …, 2017 - Wiley Online Library
Biochemical systems are among of the oldest application areas of mathematical modeling.
Spanning a time period of over one hundred years, the repertoire of options for structuring a …
Spanning a time period of over one hundred years, the repertoire of options for structuring a …
Rules for coupled expression of regulator and effector genes in inducible circuits
WS Hlavacek, MA Savageau - Journal of molecular biology, 1996 - Elsevier
The induction of effector genes that encode enzymes is often controlled by the protein
product of a regulator gene that is directly involved in the control of its own expression. This …
product of a regulator gene that is directly involved in the control of its own expression. This …
Comparative analysis of prototype two‐component systems with either bifunctional or monofunctional sensors: differences in molecular structure and physiological …
R Alves, MA Savageau - Molecular microbiology, 2003 - Wiley Online Library
Signal transduction by a traditional two‐component system involves a sensor protein that
recognizes a physiological signal, autophosphorylates and transfers its phosphate, and a …
recognizes a physiological signal, autophosphorylates and transfers its phosphate, and a …
Optimization in integrated biochemical systems
EO Voit - Biotechnology and Bioengineering, 1992 - Wiley Online Library
As of yet, steady‐state optimization in biochemical systems has been limited to a few studies
in which networks of fluxes were optimized. These networks of fluxes are represented by …
in which networks of fluxes were optimized. These networks of fluxes are represented by …
[HTML][HTML] The tricarboxylic acid cycle in Dictyostelium discoideum. I. Formulation of alternative kinetic representations
F Shiraishi, MA Savageau - Journal of Biological Chemistry, 1992 - Elsevier
Enzyme systems within living cells have recently been shown to be highly ordered structures
that violate classic assumptions of the Michaelis-Menten formalism, which originally was …
that violate classic assumptions of the Michaelis-Menten formalism, which originally was …