In Australia, the most researched and perhaps the most successful chlamydial species are
the human pathogen Chlamydia trachomatis, animal pathogens Chlamydia pecorum and …

Rapid and accurate species diagnosis accelerates performance in numerous biological
fields and associated areas. However, morphology-based species taxonomy/identification …

Abstract Background Several Multilocus Sequence Typing (MLST) schemes have been
developed for Chlamydia trachomatis. Bom's MLST scheme for MLST is based on nested …

Rice is a crucial crop to meet global food demands, therefore, it is necessary to develop
rapid, efficient and inexpensive methods for screening mutants of important genes in …

Here, we present the R package, minSNPs. This is a re-development of a previously
described Java application named Minimum SNPs. MinSNPs assembles resolution …

Background The 7.5-kb chlamydial cryptic plasmid remains a widely used sequence target
for Chlamydia trachomatis nucleic acid amplification tests, but sequence variation in this …

Objectives Typing of Chlamydia trachomatis (CT) is traditionally performed by characterising
the ompA gene, resulting in more than a dozen different genovars, A to L. Type L is …

This thesis introduces minSNPs, a novel R package that simplifies the identification of
resolutionoptimised single nucleotide polymorphism (SNP) sets in the whole genome …

Ct GEM typing was developed to subdivide the bacterial species Chlamydia trachomatis on
the basis of genome phylogeny and anatomical tropism. The rationale was facilitation of …

The rapid and accurate species diagnosis accelerates the performance to investigate
various biology elds and its relevant, perhaps but morphology-based species …