IntelliGO: a new vector-based semantic similarity measure including annotation origin

S Benabderrahmane, M Smail-Tabbone, O Poch… - BMC …, 2010 - Springer
Abstract Background The Gene Ontology (GO) is a well known controlled vocabulary
describing the biological process, molecular function and cellular component aspects of …

Biomedical knowledge extraction using fuzzy differential profiles and semantic ranking

S Benabderrahmane - Artificial Intelligence in Medicine: 14th Conference …, 2013 - Springer
Recently, technologies such as DNA microarrays allow to generate big scale of
transcriptomic data used to the aim of exploring background of genes. The analysis and the …

Enhancing transcriptomic data mining with semantic ranking: Towards a new functional spectral representation

S Benabderrahmane - International Work-Conference on Bioinformatics …, 2013 - hal.science
In biomedical domains, high throughput technologies pro-duce large amount of
transcriptomic data used for studying comportment of genes. The analysis and the …

[PDF][PDF] Ontology-based gene set enrichment analysis using an efficient semantic similarity measure and functional clustering.

S Benabderrahmane, H Mekami - ICWIT, 2012 - Citeseer
Gene set enrichment analysis allows to extract specific biological functions relative to a
group of genes. To this aim, we propose here a novel approach for mining biological data …

Prise en compte des connaissances du domaine dans l'analyse transcriptomique: Similarité sémantique, classification fonctionnelle et profils flous. Application au …

S Benabderrahmane - 2011 - theses.hal.science
L'analyse bioinformatique des données de transcriptomique a pour but d'identifier les gènes
qui présentent des variations d'expression entre différentes situations, par exemple entre …