Recent progress in non-native nucleic acid modifications
While Nature harnesses RNA and DNA to store, read and write genetic information, the
inherent programmability, synthetic accessibility and wide functionality of these nucleic acids …
inherent programmability, synthetic accessibility and wide functionality of these nucleic acids …
i-Motif DNA: structural features and significance to cell biology
The i-motif represents a paradigmatic example of the wide structural versatility of nucleic
acids. In remarkable contrast to duplex DNA, i-motifs are four-stranded DNA structures held …
acids. In remarkable contrast to duplex DNA, i-motifs are four-stranded DNA structures held …
2′-Fluoro-arabinonucleic acid (FANA): a versatile tool for probing biomolecular interactions
R El-Khoury, MJ Damha - Accounts of Chemical Research, 2021 - ACS Publications
Conspectus This Account highlights the structural features that render 2′-deoxy-2′-fluoro-
arabinonucleic acid (FANA) an ideal tool for mimicking DNA secondary structures and …
arabinonucleic acid (FANA) an ideal tool for mimicking DNA secondary structures and …
Chemical regulation of DNA i‐motifs for nanobiotechnology and therapeutics
DNA sequences rich in cytosine have the propensity, under acidic pH, to fold into four‐
stranded intercalated DNA structures called i‐motifs. Recent studies have provided …
stranded intercalated DNA structures called i‐motifs. Recent studies have provided …
The roles of DNA methylation on pH dependent i-motif (iM) formation in rice
Y Feng, X Ma, Y Yang, S Tao, A Ahmed… - Nucleic Acids …, 2024 - academic.oup.com
I-motifs (iMs) are four-stranded non-B DNA structures containing C-rich DNA sequences.
The formation of iMs is sensitive to pH conditions and DNA methylation, although the extent …
The formation of iMs is sensitive to pH conditions and DNA methylation, although the extent …
Epigenetic modification of cytosines fine tunes the stability of i-motif DNA
EP Wright, MAS Abdelhamid, MO Ehiabor… - Nucleic Acids …, 2020 - academic.oup.com
Abstract i-Motifs are widely used in nanotechnology, play a part in gene regulation and have
been detected in human nuclei. As these structures are composed of cytosine, they are …
been detected in human nuclei. As these structures are composed of cytosine, they are …
i-Motif folding intermediates with zero-nucleotide loops are trapped by 2′-fluoroarabinocytidine via F··· H and O··· H hydrogen bonds
G-quadruplex and i-motif nucleic acid structures are believed to fold through kinetic
partitioning mechanisms. Such mechanisms explain the structural heterogeneity of G …
partitioning mechanisms. Such mechanisms explain the structural heterogeneity of G …
End-ligation can dramatically stabilize i-motifs at neutral pH
R El-Khoury, MJ Damha - Chemical Communications, 2023 - pubs.rsc.org
Stabilizing i-motif structures at neutral pH and physiological temperature remains a major
challenge. Here, we demonstrate the use of chemical end-ligation to stabilize intramolecular …
challenge. Here, we demonstrate the use of chemical end-ligation to stabilize intramolecular …
i-Motif DNA: identification, formation, and cellular functions
S Tao, Y Run, D Monchaud, W Zhang - Trends in Genetics, 2024 - Elsevier
An i-motif (iM) is a four-stranded (quadruplex) DNA structure that folds from cytosine (C)-rich
sequences. iMs can fold under many different conditions in vitro, which paves the way for …
sequences. iMs can fold under many different conditions in vitro, which paves the way for …
Influence of 5-methylation and the 2′-and 3′-hydroxy substituents on the base pairing energies of protonated cytidine nucleoside analogue base pairs: implications …
YS Seidu, HA Roy, MT Rodgers - The Journal of Physical …, 2021 - ACS Publications
Repetitive nucleic acid sequences, which occur in abundance throughout the mammalian
genome, are of enormous research interest due to their potential to adopt fascinating and …
genome, are of enormous research interest due to their potential to adopt fascinating and …