Towards explainable interaction prediction: Embedding biological hierarchies into hyperbolic interaction space

D Pogány, P Antal - Plos one, 2024 - journals.plos.org
Given the prolonged timelines and high costs associated with traditional approaches,
accelerating drug development is crucial. Computational methods, particularly drug-target …

MMV method: a new approach to compare protein sequences under binary representation

J Pal, S Ghosh, B Maji… - Journal of Biomolecular …, 2024 - Taylor & Francis
In the present work, a new form of descriptor using minimal moment vector (MMV) is
introduced to compare protein sequences in the frequency domain under their component …

Hyperbolic Manifold Learning on Differential Expression Signatures

D Pogány, P Antal - Authorea Preprints, 2023 - techrxiv.org
Our paper contributes to understanding differential expression gene (DEG) signatures, a
crucial element in the study of gene expression patterns. One of the key findings of our …