Integration of the Drug–Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts
Abstract The Drug-Gene Interaction Database (DGIdb, www. dgidb. org) is a web resource
that provides information on drug-gene interactions and druggable genes from publications …
that provides information on drug-gene interactions and druggable genes from publications …
[HTML][HTML] Genetic evidence of gender difference in autism spectrum disorder supports the female-protective effect
Y Zhang, N Li, C Li, Z Zhang, H Teng, Y Wang… - Translational …, 2020 - nature.com
Autism spectrum disorder (ASD) is a complex neurodevelopmental disorder with a male-to-
female prevalence of 4: 1. However, the genetic mechanisms underlying this gender …
female prevalence of 4: 1. However, the genetic mechanisms underlying this gender …
Systematic discovery of protein interaction interfaces using AlphaFold and experimental validation
Structural resolution of protein interactions enables mechanistic and functional studies as
well as interpretation of disease variants. However, structural data is still missing for most …
well as interpretation of disease variants. However, structural data is still missing for most …
[HTML][HTML] Solving patients with rare diseases through programmatic reanalysis of genome-phenome data
Reanalysis of inconclusive exome/genome sequencing data increases the diagnosis yield
of patients with rare diseases. However, the cost and efforts required for reanalysis prevent …
of patients with rare diseases. However, the cost and efforts required for reanalysis prevent …
[HTML][HTML] An updated catalog of CTCF variants associated with neurodevelopmental disorder phenotypes
E Price, LM Fedida, EM Pugacheva, YJ Ji… - Frontiers in Molecular …, 2023 - frontiersin.org
Introduction CTCF-related disorder (CRD) is a neurodevelopmental disorder (NDD) caused
by monoallelic pathogenic variants in CTCF. The first CTCF variants in CRD cases were …
by monoallelic pathogenic variants in CTCF. The first CTCF variants in CRD cases were …
Histones: coming of age in Mendelian genetic disorders
K Knapp, N Naik, S Ray, G van Haaften… - Journal of Medical …, 2023 - jmg.bmj.com
Histones hold significant interest in development and genetic disorders due to their critical
roles in chromatin dynamics, influencing gene expression and genome integrity. These roles …
roles in chromatin dynamics, influencing gene expression and genome integrity. These roles …
[HTML][HTML] Putative complement control protein CSMD3 dysfunction impairs synaptogenesis and induces neurodevelopmental disorders
W Song, Q Li, T Wang, Y Li, T Fan, J Zhang… - Brain, Behavior, and …, 2022 - Elsevier
Recent studies have reported that complement-related proteins modulate brain
development through regulating synapse processes in the cortex. CSMD3 belongs to a …
development through regulating synapse processes in the cortex. CSMD3 belongs to a …
VarCards2: an integrated genetic and clinical database for ACMG-AMP variant-interpretation guidelines in the human whole genome
Z Wang, G Zhao, Z Zhu, Y Wang, X Xiang… - Nucleic Acids …, 2024 - academic.oup.com
VarCards, an online database, combines comprehensive variant-and gene-level annotation
data to streamline genetic counselling for coding variants. Recognising the increasing …
data to streamline genetic counselling for coding variants. Recognising the increasing …
Performance evaluation of differential splicing analysis methods and splicing analytics platform construction
K Li, T Luo, Y Zhu, Y Huang, A Wang… - Nucleic Acids …, 2022 - academic.oup.com
A proportion of previously defined benign variants or variants of uncertain significance in
humans, which are challenging to identify, may induce an abnormal splicing process. An …
humans, which are challenging to identify, may induce an abnormal splicing process. An …
CircleBase: an integrated resource and analysis platform for human eccDNAs
Rapid advances in high-throughput sequencing technologies have led to the discovery of
thousands of extrachromosomal circular DNAs (eccDNAs) in the human genome. Loss-of …
thousands of extrachromosomal circular DNAs (eccDNAs) in the human genome. Loss-of …