Activity-based profiling of proteases
Proteolytic enzymes are key signaling molecules in both normal physiological processes
and various diseases. After synthesis, protease activity is tightly controlled. Consequently …
and various diseases. After synthesis, protease activity is tightly controlled. Consequently …
The opening dynamics of the lateral gate regulates the activity of rhomboid proteases
C Bohg, C Öster, B Türkaydin, M Lisurek… - Science …, 2023 - science.org
Rhomboid proteases hydrolyze substrate helices within the lipid bilayer to release soluble
domains from the membrane. Here, we investigate the mechanism of activity regulation for …
domains from the membrane. Here, we investigate the mechanism of activity regulation for …
Activity-based protein profiling of microbes
Highlights•ABPP enabled proteomics and imaging provides insight into microbial
physiology.•Microbe functions, drug interactions, and pathways are revealed by …
physiology.•Microbe functions, drug interactions, and pathways are revealed by …
Interrogating membrane protein conformational dynamics within native lipid compositions
The interplay between membrane proteins and the lipids of the membrane is important for
cellular function, however, tools enabling the interrogation of protein dynamics within native …
cellular function, however, tools enabling the interrogation of protein dynamics within native …
AIG1 and ADTRP are atypical integral membrane hydrolases that degrade bioactive FAHFAs
Enzyme classes may contain outlier members that share mechanistic, but not sequence or
structural, relatedness with more common representatives. The functional annotation of such …
structural, relatedness with more common representatives. The functional annotation of such …
[HTML][HTML] Residue-by-residue analysis of cotranslational membrane protein integration in vivo
F Nicolaus, A Metola, D Mermans, A Liljenström, A Krč… - Elife, 2021 - elifesciences.org
We follow the cotranslational biosynthesis of three multispanning Escherichia coli inner
membrane proteins in vivo using high-resolution force profile analysis. The force profiles …
membrane proteins in vivo using high-resolution force profile analysis. The force profiles …
Activity-based probes for rhomboid proteases discovered in a mass spectrometry-based assay
O Vosyka, KR Vinothkumar, EV Wolf… - Proceedings of the …, 2013 - National Acad Sciences
Rhomboid proteases are evolutionary conserved intramembrane serine proteases. Because
of their emerging role in many important biological pathways, rhomboids are potential drug …
of their emerging role in many important biological pathways, rhomboids are potential drug …
Steric trapping reveals a cooperativity network in the intramembrane protease GlpG
Membrane proteins are assembled through balanced interactions among proteins, lipids
and water. Studying their folding while maintaining the native lipid environment is necessary …
and water. Studying their folding while maintaining the native lipid environment is necessary …
Reactions at biomembrane interfaces
AN Bondar, MJ Lemieux - Chemical reviews, 2019 - ACS Publications
Membranes surrounding the biological cell and its internal compartments host proteins that
catalyze chemical reactions essential for the functioning of the cell. Rather than being a …
catalyze chemical reactions essential for the functioning of the cell. Rather than being a …
Discovery of cellular roles of intramembrane proteases
HA Beard, M Barniol-Xicota, J Yang… - ACS Chemical …, 2019 - ACS Publications
Intramembrane proteases (IMPs) are localized within lipid bilayers of membranes—either
the cell membrane or membranes of various organelles. Cleavage of substrates often results …
the cell membrane or membranes of various organelles. Cleavage of substrates often results …