[HTML][HTML] A neural network-based joint learning approach for biomedical entity and relation extraction from biomedical literature
Recently joint modeling methods of entity and relation exhibit more promising results than
traditional pipelined methods in general domain. However, they are inappropriate for the …
traditional pipelined methods in general domain. However, they are inappropriate for the …
Formal concept analysis: from knowledge discovery to knowledge processing
In this chapter, we introduce Formal Concept Analysis (FCA) and some of its extensions.
FCA is a formalism based on lattice theory aimed at data analysis and knowledge …
FCA is a formalism based on lattice theory aimed at data analysis and knowledge …
Identifying protein-protein interaction using tree LSTM and structured attention
Identifying interactions between proteins is important to understand underlying biological
processes. Extracting a protein-protein interaction (PPI) from the raw text is often very …
processes. Extracting a protein-protein interaction (PPI) from the raw text is often very …
Pattern structures and concept lattices for data mining and knowledge processing
M Kaytoue, V Codocedo, A Buzmakov… - Machine Learning and …, 2015 - Springer
This article aims at presenting recent advances in Formal Concept Analysis (2010-2015),
especially when the question is dealing with complex data (numbers, graphs, sequences …
especially when the question is dealing with complex data (numbers, graphs, sequences …
Multi-granularity sequential neural network for document-level biomedical relation extraction
Document-level biomedical relation extraction aims to extract the relation between multiple
mentions of entities throughout an entire document. However, most methods suffer from long …
mentions of entities throughout an entire document. However, most methods suffer from long …
Concepts of neighbors and their application to instance-based learning on relational data
Abstract Knowledge graphs and other forms of relational data have become a widespread
kind of data, and powerful methods to analyze and learn from them are needed. Formal …
kind of data, and powerful methods to analyze and learn from them are needed. Formal …
ParaDis and Démonette–from theory to resources for derivational paradigms
In this article, we trace the genesis of the French derivational database Démonette and show
how its architecture and content stem from recent theoretical developments in derivational …
how its architecture and content stem from recent theoretical developments in derivational …
Identifying Protein-Protein Interaction using Tree-Transformers and Heterogeneous Graph Neural Network
SS Roy, R Mercer - The International FLAIRS Conference …, 2023 - journals.flvc.org
For a better understanding of the underlying biological mechanisms, it is crucial to identify
the reciprocity between proteins. Often, extracting such interactions between proteins from …
the reciprocity between proteins. Often, extracting such interactions between proteins from …
A two-step approach for explainable relation extraction
Abstract Knowledge Graphs (KG) offer easy-to-process information. An important issue to
build a KG from texts is the Relation Extraction (RE) task that identifies and labels …
build a KG from texts is the Relation Extraction (RE) task that identifies and labels …
Extracting relations in texts with concepts of neighbours
During the last decade, the need for reliable and massive Knowledge Graphs (KG)
increased. KGs can be created in several ways: manually with forms or automatically with …
increased. KGs can be created in several ways: manually with forms or automatically with …