Ion mobility mass spectrometry (IM-MS) for structural biology: insights gained by measuring mass, charge, and collision cross section

E Christofi, P Barran - Chemical Reviews, 2023 - ACS Publications
The investigation of macromolecular biomolecules with ion mobility mass spectrometry (IM-
MS) techniques has provided substantial insights into the field of structural biology over the …

Mass spectrometry-based protein footprinting for higher-order structure analysis: fundamentals and applications

XR Liu, MM Zhang, ML Gross - Chemical reviews, 2020 - ACS Publications
Proteins adopt different higher-order structures (HOS) to enable their unique biological
functions. Understanding the complexities of protein higher-order structures and dynamics …

Surface-induced dissociation mass spectrometry as a structural biology tool

DT Snyder, SR Harvey, VH Wysocki - Chemical reviews, 2021 - ACS Publications
Native mass spectrometry (nMS) is evolving into a workhorse for structural biology. The
plethora of online and offline preparation, separation, and purification methods as well as …

Approaches to heterogeneity in native mass spectrometry

AD Rolland, JS Prell - Chemical reviews, 2021 - ACS Publications
Native mass spectrometry (MS) is aimed at preserving and determining the native structure,
composition, and stoichiometry of biomolecules and their complexes from solution after they …

Ion activation methods for peptides and proteins

LA Macias, IC Santos, JS Brodbelt - Analytical chemistry, 2019 - ACS Publications
Mass spectrometry is well-established as one of the primary methods used to characterize
peptides and proteins. New advances in instrumentation and innovative analytical workflows …

[HTML][HTML] Protein complex prediction using Rosetta, AlphaFold, and mass spectrometry covalent labeling

ZC Drake, JT Seffernick, S Lindert - Nature communications, 2022 - nature.com
Covalent labeling (CL) in combination with mass spectrometry can be used as an analytical
tool to study and determine structural properties of protein-protein complexes. However …

Native top‐down mass spectrometry for higher‐order structural characterization of proteins and complexes

R Liu, S Xia, H Li - Mass spectrometry reviews, 2023 - Wiley Online Library
Progress in structural biology research has led to a high demand for powerful and yet
complementary analytical tools for structural characterization of proteins and protein …

[HTML][HTML] Hybrid methods for combined experimental and computational determination of protein structure

JT Seffernick, S Lindert - The Journal of chemical physics, 2020 - pubs.aip.org
Knowledge of protein structure is paramount to the understanding of biological function,
developing new therapeutics, and making detailed mechanistic hypotheses. Therefore …

Structural studies of a stapled peptide with native ion mobility-mass spectrometry and transition metal ion förster resonance energy transfer in the gas phase

R Wu, JB Metternich, P Tiwari… - Journal of the …, 2022 - ACS Publications
Native mass spectrometry has emerged as an important tool for gas-phase structural
biology. However, the conformations that a biomolecular ion adopts in the gas phase can …

[HTML][HTML] Accurate protein structure prediction with hydroxyl radical protein footprinting data

SE Biehn, S Lindert - Nature communications, 2021 - nature.com
Hydroxyl radical protein footprinting (HRPF) in combination with mass spectrometry reveals
the relative solvent exposure of labeled residues within a protein, thereby providing insight …