Equilibrium mechanisms of self-limiting assembly
Self-assembly is a ubiquitous process in synthetic and biological systems, broadly defined
as the spontaneous organization of multiple subunits (macromolecules, particles, etc.) into …
as the spontaneous organization of multiple subunits (macromolecules, particles, etc.) into …
Mechanical properties of viruses analyzed by atomic force microscopy: a virological perspective
MG Mateu - Virus research, 2012 - Elsevier
The advent of nanoscience and nanotechnology and the development of atomic force
microscopy and other single-molecule techniques are leading to a renewed look at viruses …
microscopy and other single-molecule techniques are leading to a renewed look at viruses …
Modeling viral capsid assembly
MF Hagan - Advances in Chemical Physics: Volume 155, 2014 - Wiley Online Library
Viruses play a role in a significant portion of human diseases, as well as those of other
animals, plants, and bacteria. This chapter focuses on the use of theoretical and …
animals, plants, and bacteria. This chapter focuses on the use of theoretical and …
All-atom molecular dynamics of the HBV capsid reveals insights into biological function and cryo-EM resolution limits
The hepatitis B virus capsid represents a promising therapeutic target. Experiments suggest
the capsid must be flexible to function; however, capsid structure and dynamics have not …
the capsid must be flexible to function; however, capsid structure and dynamics have not …
Multiscale modeling of hepatitis B virus capsid assembly and its dimorphism
Hepatitis B virus (HBV) is an endemic, chronic virus that leads to 800000 deaths per year.
Central to the HBV lifecycle, the viral core has a protein capsid assembled from many copies …
Central to the HBV lifecycle, the viral core has a protein capsid assembled from many copies …
Mechanics of bacteriophage maturation
Capsid maturation with large-scale subunit reorganization occurs in virtually all viruses that
use a motor to package nucleic acid into preformed particles. A variety of ensemble studies …
use a motor to package nucleic acid into preformed particles. A variety of ensemble studies …
Computer simulation studies of self-assembling macromolecules
Coarse-grained (CG) molecular models are now widely used to understand the structure
and functionality of macromolecular self-assembling systems. In the last few years …
and functionality of macromolecular self-assembling systems. In the last few years …
Integrin and defensin modulate the mechanical properties of adenovirus
The propensity for capsid disassembly and uncoating of human adenovirus is modulated by
interactions with host cell molecules like integrins and alpha defensins. Here, we use atomic …
interactions with host cell molecules like integrins and alpha defensins. Here, we use atomic …
Optical trapping, sizing, and probing acoustic modes of a small virus
Featured Application Sizing and measurement of vibrational frequencies of viruses could be
useful for diagnostic purposes, as well as for targeted destruction via resonant excitation of …
useful for diagnostic purposes, as well as for targeted destruction via resonant excitation of …
The role of the encapsulated cargo in microcompartment assembly
F Mohajerani, MF Hagan - PLoS computational biology, 2018 - journals.plos.org
Bacterial microcompartments are large, roughly icosahedral shells that assemble around
enzymes and reactants involved in certain metabolic pathways in bacteria. Motivated by …
enzymes and reactants involved in certain metabolic pathways in bacteria. Motivated by …