The origin of niches and species in the bacterial world

F Baquero, TM Coque, JC Galán… - Frontiers in …, 2021 - frontiersin.org
Niches are spaces for the biological units of selection, from cells to complex communities. In
a broad sense,“species” are biological units of individuation. Niches do not exist without …

Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae

KL Wyres, RR Wick, LM Judd, R Froumine… - PLoS …, 2019 - journals.plos.org
Klebsiella pneumoniae has emerged as an important cause of two distinct public health
threats: multi-drug resistant (MDR) healthcare-associated infections and drug susceptible …

Recombination in Bacterial Genomes: Evolutionary Trends

AE Shikov, IA Savina, AA Nizhnikov, KS Antonets - Toxins, 2023 - mdpi.com
Bacterial organisms have undergone homologous recombination (HR) and horizontal gene
transfer (HGT) multiple times during their history. These processes could increase fitness to …

Genomic analysis of the international high-risk clonal lineage Klebsiella pneumoniae sequence type 395

ER Shaidullina, M Schwabe, T Rohde… - Genome Medicine, 2023 - Springer
Background Klebsiella pneumoniae, which is frequently associated with hospital-and
community-acquired infections, contains multidrug-resistant (MDR), hypervirulent (hv), non …

Comparison of core-genome MLST, coreSNP and PFGE methods for Klebsiella pneumoniae cluster analysis

F Gona, F Comandatore, S Battaglia… - Microbial …, 2020 - microbiologyresearch.org
In this work we compared the most frequently used Klebsiella pneumoniae typing methods:
PFGE, cgMLST and coreSNP. We evaluated the discriminatory power of the three methods …

Recombination drives evolution of carbapenem-resistant Klebsiella pneumoniae sequence type 11 KL47 to KL64 in China

T Chen, Y Wang, Y Zhou, W Zhou, X Chi… - Microbiology …, 2023 - Am Soc Microbiol
Carbapenem-resistant Enterobacteriaceae, especially carbapenemase-producing
Klebsiella pneumoniae, is an urgent problem in health care facilities worldwide. K …

Genomic epidemiological analysis of Klebsiella pneumoniae from Portuguese hospitals reveals insights into circulating antimicrobial resistance

A Spadar, J Phelan, R Elias, A Modesto, C Caneiras… - Scientific Reports, 2022 - nature.com
Klebsiella pneumoniae (Kp) bacteria are an increasing threat to public health and represent
one of the most concerning pathogens involved in life-threatening infections and …

Unravelling the Evolutionary Dynamics of High-Risk Klebsiella pneumoniae ST147 Clones: Insights from Comparative Pangenome Analysis

S Dey, M Gaur, EME Sykes, M Prusty, S Elangovan… - Genes, 2023 - mdpi.com
Background: The high prevalence and rapid emergence of antibiotic resistance in high-risk
Klebsiella pneumoniae (KP) ST147 clones is a global health concern and warrants …

Detection of a NDM-5-producing Klebsiella pneumoniae sequence type 340 (CG258) high-risk clone in swine

W Zhao, S Li, S Schwarz, A Li, H Yao, XD Du - Veterinary Microbiology, 2021 - Elsevier
The emergence and rapid increase of carbapenem-resistant Enterobacteriaceae among
food-producing animals poses a serious threat to public health. The aim of this study was to …

Genetic barriers more than environmental associations explain Serratia marcescens population structure

L Sterzi, R Nodari, F Di Marco, ML Ferrando… - Communications …, 2024 - nature.com
Bacterial species often comprise well-separated lineages, likely emerged and maintained by
genetic isolation and/or ecological divergence. How these two evolutionary actors interact in …