[HTML][HTML] Cell wall hydrolases in bacteria: insight on the diversity of cell wall amidases, glycosidases and peptidases toward peptidoglycan
A Vermassen, S Leroy, R Talon, C Provot… - Frontiers in …, 2019 - frontiersin.org
The cell wall (CW) of bacteria is an intricate arrangement of macromolecules, at least
constituted of peptidoglycan (PG) but also of (lipo) teichoic acids, various polysaccharides …
constituted of peptidoglycan (PG) but also of (lipo) teichoic acids, various polysaccharides …
Biosynthesis of nitrogenase cofactors
S Burén, E Jiménez-Vicente… - Chemical …, 2020 - ACS Publications
Nitrogenase harbors three distinct metal prosthetic groups that are required for its activity.
The simplest one is a [4Fe-4S] cluster located at the Fe protein nitrogenase component. The …
The simplest one is a [4Fe-4S] cluster located at the Fe protein nitrogenase component. The …
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center
B Amos, C Aurrecoechea, M Barba… - Nucleic Acids …, 2022 - academic.oup.com
Abstract The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB,
https://veupathdb. org) represents the 2019 merger of VectorBase with the EuPathDB …
https://veupathdb. org) represents the 2019 merger of VectorBase with the EuPathDB …
PANTHER version 16: a revised family classification, tree-based classification tool, enhancer regions and extensive API
H Mi, D Ebert, A Muruganujan, C Mills… - Nucleic acids …, 2021 - academic.oup.com
Abstract PANTHER (Protein Analysis Through Evolutionary Relationships, http://www.
pantherdb. org) is a resource for the evolutionary and functional classification of protein …
pantherdb. org) is a resource for the evolutionary and functional classification of protein …
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
Cellular life depends on a complex web of functional associations between biomolecules.
Among these associations, protein–protein interactions are particularly important due to their …
Among these associations, protein–protein interactions are particularly important due to their …
UniProt: the universal protein knowledgebase in 2021
Nucleic acids research, 2021 - academic.oup.com
The aim of the UniProt Knowledgebase is to provide users with a comprehensive, high-
quality and freely accessible set of protein sequences annotated with functional information …
quality and freely accessible set of protein sequences annotated with functional information …
The InterPro protein families and domains database: 20 years on
M Blum, HY Chang, S Chuguransky… - Nucleic acids …, 2021 - academic.oup.com
Abstract The InterPro database (https://www. ebi. ac. uk/interpro/) provides an integrative
classification of protein sequences into families, and identifies functionally important …
classification of protein sequences into families, and identifies functionally important …
Pfam: The protein families database in 2021
J Mistry, S Chuguransky, L Williams… - Nucleic acids …, 2021 - academic.oup.com
The Pfam database is a widely used resource for classifying protein sequences into families
and domains. Since Pfam was last described in this journal, over 350 new families have …
and domains. Since Pfam was last described in this journal, over 350 new families have …
COG database update: focus on microbial diversity, model organisms, and widespread pathogens
MY Galperin, YI Wolf, KS Makarova… - Nucleic acids …, 2021 - academic.oup.com
Abstract The Clusters of Orthologous Genes (COG) database, also referred to as the
Clusters of Orthologous Groups of proteins, was created in 1997 and went through several …
Clusters of Orthologous Groups of proteins, was created in 1997 and went through several …
BRENDA, the ELIXIR core data resource in 2021: new developments and updates
The BRENDA enzyme database (https://www. brenda-enzymes. org), established in 1987,
has evolved into the main collection of functional enzyme and metabolism data. In 2018 …
has evolved into the main collection of functional enzyme and metabolism data. In 2018 …