Genome-wide selection signatures address trait specific candidate genes in cattle indigenous to arid regions of India

N Sukhija, AA Malik, JM Devadasan, A Dash… - Animal …, 2024 - Taylor & Francis
The peculiarity of Indian cattle lies in milk quality, resistance to diseases and stressors as
well as adaptability. The investigation addressed selection signatures in Gir and Tharparkar …

Evolutionary stamps for adaptation traced in Cervus nippon genome using reduced representation sequencing

N Sukhija, RC Goli, M Sukhija, P Rathi… - Conservation Genetics …, 2024 - Springer
Sika deer is indigenous to East Asia. Currently the species is extinct or are nearing the verge
of extinction, in numerous places. Reduced population size is sensitive to climate change …

Screening Indels from the whole genome to identify the candidates and their association with economic traits in several goat breeds

AA Saleh, L Xue, Y Zhao - Functional & Integrative Genomics, 2023 - Springer
In the present study, the re-sequencing of our previous whole-genome sequencing (WGS)
for selected individuals of Dazu-black goat (DBG) and Inner-Mongolia Cashmere goat …

Characterization and comparison of metabolites in colostrum from yaks, buffaloes, and cows based on UPLC-QTRAP-MS metabolomics

X Zhang, C Li, J Huang, Q Zeng, L Li, P Yang, P Wang… - Food Chemistry, 2024 - Elsevier
Colostrum from yaks and buffaloes possesses substantial nutritional value, yet the complete
array of metabolites within remains insufficiently elucidated. This study scrutinizes the …

Genome-wide identification of SNPs and their annotation in Indian gir cattle

A Choudhary, MJ Devadasan, N Sukhija… - Cytology and …, 2024 - Springer
The study was carried out in Gir cattle for identification of genome wide SNPs and then to
annotate the identified high-quality SNPs to the milk production traits. A total of 99 517 SNPs …

Insights from homozygous signatures of cervus nippon revealed genetic architecture for components of fitness

RC Goli, K Mahar, PS Manohar, KG Chishi… - Mammalian …, 2024 - Springer
This study investigates the genomic landscape of Sika deer populations, emphasizing the
detection and characterization of runs of homozygosity (ROH) and their contribution towards …

Phenotypic and genetic characterization of unexplored, potential cattle population of Madhya Pradesh

J Sivalingam, SK Niranjan, DK Yadav, SP Singh… - Tropical Animal Health …, 2024 - Springer
Bawri or Garri, a non-descript cattle population managed under an extensive system in
Madhya Pradesh state of India, was identified and characterized both genetically and …

Investigation of phenotypic, genetic and genomic background of Milk spectra in Sarda dairy sheep

M Congiu, L Falchi, S Carta, A Cesarani… - Journal of Animal …, 2024 - Wiley Online Library
Aim of this study was to analyse the genetic background of milk Fourier transform infrared
(FTIR) spectra in dairy sheep. Individual milk FTIR spectra, with 1060 wavenumbers each …

[PDF][PDF] Deep Learning in Neural Networks and their Application in Genomics

KK Kanaka, N Sukhija, J Sivalingam… - … Sciences (ISSN: 2582 …, 2023 - academia.edu
Deep learning has emerged as a powerful tool in genomics, utilizing neural networks to
uncover complex patterns in large datasets. This review explores the application of deep …

[PDF][PDF] Solutions to Post-GWAS Regulatory Variants in Bovine

N Sukhija, KK Kanaka, J Sivalingam… - … Sciences (ISSN: 2582 …, 2023 - researchgate.net
Abstract Advancements in Next Generation Sequencing have led to an increased
exploration of the genome and transcriptome to uncover genetic variants associated with …