The sequenced angiosperm genomes and genome databases

F Chen, W Dong, J Zhang, X Guo, J Chen… - Frontiers in plant …, 2018 - frontiersin.org
Angiosperms, the flowering plants, provide the essential resources for human life, such as
food, energy, oxygen, and materials. They also promoted the evolution of human, animals …

The tify family previously known as ZIM

B Vanholme, W Grunewald, A Bateman, T Kohchi… - Trends in plant …, 2007 - cell.com
The ZIM domain was originally identified in the ZIM protein (BAA97679; Zinc-finger protein
expressed in Inflorescence Meristem). Since then it has been found in other proteins and the …

The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana

SB Cannon, A Mitra, A Baumgarten, ND Young… - BMC plant biology, 2004 - Springer
Abstract Background Most genes in Arabidopsis thaliana are members of gene families.
How do the members of gene families arise, and how are gene family copy numbers …

Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution

G Blanc, KH Wolfe - The Plant Cell, 2004 - academic.oup.com
To study the evolutionary effects of polyploidy on plant gene functions, we analyzed
functional genomics data for a large number of duplicated gene pairs formed by ancient …

Transcriptome of Arabidopsis leaf senescence

Y Guo, Z Cai, S Gan - Plant, cell & environment, 2004 - Wiley Online Library
Leaf senescence is a complex developmental process during which essential nutrients are
recycled. In order to unravel the biochemical pathways and regulatory mechanisms that …

An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics

MG Rosso, Y Li, N Strizhov, B Reiss, K Dekker… - Plant molecular …, 2003 - Springer
The GABI-Kat population of T-DNA mutagenized Arabidopsis thaliana lines with sequence-
characterized insertion sites is used extensively for efficient progress in plant functional …

The Botany Array Resource: e‐Northerns, expression angling, and promoter analyses

K Toufighi, SM Brady, R Austin, E Ly… - The Plant …, 2005 - Wiley Online Library
Summary The Botany Array Resource provides the means for obtaining and archiving
microarray data for Arabidopsis thaliana as well as biologist‐friendly tools for viewing and …

Genome‐wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed

K Nakabayashi, M Okamoto, T Koshiba… - The plant …, 2005 - Wiley Online Library
To reveal the transcriptomes of Arabidopsis seed, comprehensive expression analysis was
performed using ATH1 GeneChips (Affymetrix, Santa Clara, CA, USA). In the dry seed, more …

MIPS: a database for genomes and protein sequences

HW Mewes, D Frishman, U Güldener… - Nucleic acids …, 2002 - academic.oup.com
Abstract The Munich Information Center for Protein Sequences (MIPS-GSF, Neuherberg,
Germany) continues to provide genome-related information in a systematic way. MIPS …

Disruption of phytoene desaturase gene results in albino and dwarf phenotypes in Arabidopsis by impairing chlorophyll, carotenoid, and gibberellin biosynthesis

G Qin, H Gu, L Ma, Y Peng, XW Deng, Z Chen, LJ Qu - Cell research, 2007 - nature.com
Carotenoids play an important role in many physiological processes in plants and the
phytoene desaturase gene (PDS3) encodes one of the important enzymes in the carotenoid …