Targeting PI3K/Akt signal transduction for cancer therapy

Y He, MM Sun, GG Zhang, J Yang, KS Chen… - Signal transduction and …, 2021 - nature.com
Abstract The phosphatidylinositol 3-kinase (PI3K)/Akt pathway plays a crucial role in various
cellular processes and is aberrantly activated in cancers, contributing to the occurrence and …

Stochastic modelling for quantitative description of heterogeneous biological systems

DJ Wilkinson - Nature Reviews Genetics, 2009 - nature.com
Two related developments are currently changing traditional approaches to computational
systems biology modelling. First, stochastic models are being used increasingly in …

Feedback between p21 and reactive oxygen production is necessary for cell senescence

JF Passos, G Nelson, C Wang, T Richter… - Molecular systems …, 2010 - embopress.org
Cellular senescence—the permanent arrest of cycling in normally proliferating cells such as
fibroblasts—contributes both to age‐related loss of mammalian tissue homeostasis and acts …

Cancer systems biology: a network modeling perspective

PK Kreeger, DA Lauffenburger - Carcinogenesis, 2010 - academic.oup.com
Cancer is now appreciated as not only a highly heterogenous pathology with respect to cell
type and tissue origin but also as a disease involving dysregulation of multiple pathways …

The ups and downs of p53: understanding protein dynamics in single cells

E Batchelor, A Loewer, G Lahav - Nature Reviews Cancer, 2009 - nature.com
Cells living in a complex environment must constantly detect, process and appropriately
respond to changing signals. Therefore, all cellular information processing is dynamic in …

Attractor landscape analysis reveals feedback loops in the p53 network that control the cellular response to DNA damage

M Choi, J Shi, SH Jung, X Chen, KH Cho - Science signaling, 2012 - science.org
The protein p53 functions as a tumor suppressor and can trigger either cell cycle arrest or
apoptosis in response to DNA damage. We used Boolean network modeling and attractor …

Modelling the molecular mechanisms of aging

MT Mc Auley, AM Guimera, D Hodgson… - Bioscience …, 2017 - portlandpress.com
The aging process is driven at the cellular level by random molecular damage that slowly
accumulates with age. Although cells possess mechanisms to repair or remove damage …

Systems biology of ageing and longevity

TBL Kirkwood - … Transactions of the Royal Society B …, 2011 - royalsocietypublishing.org
Ageing is intrinsically complex, being driven by multiple causal mechanisms. Each
mechanism tends to be partially supported by data indicating that it has a role in the overall …

Reactive oxygen species, superoxide dimutases, and PTEN-p53-AKT-MDM2 signaling loop network in mesenchymal stem/stromal cells regulation

S Matsuda, Y Nakagawa, Y Kitagishi, A Nakanishi… - Cells, 2018 - mdpi.com
Mesenchymal stromal/stem cells (MSCs) are multipotent cells that can differentiate to
various specialized cells, which have the potential capacity to differentiate properly and …

BioModels: content, features, functionality, and use

N Juty, R Ali, M Glont, S Keating… - CPT …, 2015 - Wiley Online Library
BioModels is a reference repository hosting mathematical models that describe the dynamic
interactions of biological components at various scales. The resource provides access to …