Uncertainty quantification in drug design

LH Mervin, S Johansson, E Semenova, KA Giblin… - Drug discovery today, 2021 - Elsevier
Highlights•Review of the state-of-the-art in uncertainty quantification in drug
design.•Examples from drug-design settings are provided.•Impact on decision making is …

A survey of uncertainty in deep neural networks

J Gawlikowski, CRN Tassi, M Ali, J Lee, M Humt… - Artificial Intelligence …, 2023 - Springer
Over the last decade, neural networks have reached almost every field of science and
become a crucial part of various real world applications. Due to the increasing spread …

Reinventing 2d convolutions for 3d images

J Yang, X Huang, Y He, J Xu, C Yang… - IEEE Journal of …, 2021 - ieeexplore.ieee.org
There have been considerable debates over 2D and 3D representation learning on 3D
medical images. 2D approaches could benefit from large-scale 2D pretraining, whereas they …

Pairwise difference regression: a machine learning meta-algorithm for improved prediction and uncertainty quantification in chemical search

M Tynes, W Gao, DJ Burrill, ER Batista… - Journal of chemical …, 2021 - ACS Publications
Machine learning (ML) plays a growing role in the design and discovery of chemicals,
aiming to reduce the need to perform expensive experiments and simulations. ML for such …

Uncertainty Quantification in Machine Learning for Biosignal Applications--A Review

IP de Jong, AI Sburlea, M Valdenegro-Toro - arXiv preprint arXiv …, 2023 - arxiv.org
Uncertainty Quantification (UQ) has gained traction in an attempt to fix the black-box nature
of Deep Learning. Specifically (medical) biosignals such as electroencephalography (EEG) …

AlignShift: Bridging the Gap of Imaging Thickness in 3D Anisotropic Volumes

J Yang, Y He, X Huang, J Xu, X Ye, G Tao… - Medical Image Computing …, 2020 - Springer
This paper addresses a fundamental challenge in 3D medical image processing: how to
deal with imaging thickness. For anisotropic medical volumes, there is a significant …

Hierarchical classification of pulmonary lesions: a large-scale radio-pathomics study

J Yang, M Gao, K Kuang, B Ni, Y She, D Xie… - … Image Computing and …, 2020 - Springer
Diagnosis of pulmonary lesions from computed tomography (CT) is important but
challenging for clinical decision making in lung cancer related diseases. Deep learning has …

Uncertainty Quantification for cross-subject Motor Imagery classification

P Manivannan, IP de Jong, M Valdenegro-Toro… - arXiv preprint arXiv …, 2024 - arxiv.org
Uncertainty Quantification aims to determine when the prediction from a Machine Learning
model is likely to be wrong. Computer Vision research has explored methods for …

Spatial-Temporal-Fusion BNN: Variational Bayesian Feature Layer

S Lei, Z Tu, L Rutkowski, F Zhou, L Shen, F He… - arXiv preprint arXiv …, 2021 - arxiv.org
Bayesian neural networks (BNNs) have become a principal approach to alleviate
overconfident predictions in deep learning, but they often suffer from scaling issues due to a …

[PDF][PDF] Multi-Scale Evaluation of Uncertainty Quantification Techniques for Deep Learning based MRI Segmentation

B Lambert, F Forbes, A Tucholka, S Doyle… - ISMRM-ESMRMB & …, 2022 - hal.science
WWee eevvaalluuaattee 33 ssttaattee--ooff--tthhee--aarrtt tteecchhnniiqquueess ffoorr
uunncceerrttaaiinnttyy qquuaannttiiggccaattiioonn:: MMoonnttee--CCaarrlloo …