Building pan-genome infrastructures for crop plants and their use in association genetics
Pan-genomic studies aim at representing the entire sequence diversity within a species to
provide useful resources for evolutionary studies, functional genomics and breeding of …
provide useful resources for evolutionary studies, functional genomics and breeding of …
Precise integration of large DNA sequences in plant genomes using PrimeRoot editors
A technique for chromosomal insertion of large DNA segments is much needed in plant
breeding and synthetic biology to facilitate the introduction of desired agronomic traits and …
breeding and synthetic biology to facilitate the introduction of desired agronomic traits and …
GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
The development of multiple chromosome-scale reference genome sequences in many
taxonomic groups has yielded a high-resolution view of the patterns and processes of …
taxonomic groups has yielded a high-resolution view of the patterns and processes of …
Genome editing of a rice CDP-DAG synthase confers multipathogen resistance
G Sha, P Sun, X Kong, X Han, Q Sun, L Fouillen… - Nature, 2023 - nature.com
The discovery and application of genome editing introduced a new era of plant breeding by
giving researchers efficient tools for the precise engineering of crop genomes. Here we …
giving researchers efficient tools for the precise engineering of crop genomes. Here we …
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass
Long-term climate change and periodic environmental extremes threaten food and fuel
security and global crop productivity,–. Although molecular and adaptive breeding strategies …
security and global crop productivity,–. Although molecular and adaptive breeding strategies …
Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9
Targeted insertion of transgenes at pre-determined plant genomic safe harbors provides a
desirable alternative to insertions at random sites achieved through conventional methods …
desirable alternative to insertions at random sites achieved through conventional methods …
Long-read sequencing of 111 rice genomes reveals significantly larger pan-genomes
F Zhang, H Xue, X Dong, M Li, X Zheng, Z Li… - Genome …, 2022 - genome.cshlp.org
The concept of pan-genome, which is the collection of all genomes from a population, has
shown a great potential in genomics study, especially for crop sciences. The rice pan …
shown a great potential in genomics study, especially for crop sciences. The rice pan …
Plant pangenomes for crop improvement, biodiversity and evolution
Plant genome sequences catalogue genes and the genetic elements that regulate their
expression. Such inventories further research aims as diverse as mapping the molecular …
expression. Such inventories further research aims as diverse as mapping the molecular …
High‐efficiency prime editing enables new strategies for broad‐spectrum resistance to bacterial blight of rice
Using genetic resistance against bacterial blight (BB) caused by Xanthomonas oryzae
pathovar oryzae (Xoo) is a major objective in rice breeding programmes. Prime editing (PE) …
pathovar oryzae (Xoo) is a major objective in rice breeding programmes. Prime editing (PE) …
[HTML][HTML] Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet
Finger millet is a key food security crop widely grown in eastern Africa, India and Nepal.
Long considered a 'poor man's crop', finger millet has regained attention over the past …
Long considered a 'poor man's crop', finger millet has regained attention over the past …