Best‐practice DFT protocols for basic molecular computational chemistry
Nowadays, many chemical investigations are supported by routine calculations of molecular
structures, reaction energies, barrier heights, and spectroscopic properties. The lion's share …
structures, reaction energies, barrier heights, and spectroscopic properties. The lion's share …
Reactivity of covalent fragments and their role in fragment based drug discovery
K McAulay, A Bilsland, M Bon - Pharmaceuticals, 2022 - mdpi.com
Fragment based drug discovery has long been used for the identification of new ligands and
interest in targeted covalent inhibitors has continued to grow in recent years, with high …
interest in targeted covalent inhibitors has continued to grow in recent years, with high …
Efficient quantum chemical calculation of structure ensembles and free energies for nonrigid molecules
The application of quantum chemical, automatic multilevel modeling workflows for the
determination of thermodynamic (eg, conformation equilibria, partition coefficients, p K a …
determination of thermodynamic (eg, conformation equilibria, partition coefficients, p K a …
Automated molecular cluster growing for explicit solvation by efficient force field and tight binding methods
An automated and broadly applicable workflow for the description of solvation effects in an
explicit manner is introduced. This method, termed quantum cluster growth (QCG), is based …
explicit manner is introduced. This method, termed quantum cluster growth (QCG), is based …
Beyond continuum solvent models in computational homogeneous catalysis
In homogeneous catalysis solvent is an inherent part of the catalytic system. As such, it must
be considered in the computational modeling. The most common approach to include …
be considered in the computational modeling. The most common approach to include …
Computing Kinetic Solvent Effects and Liquid Phase Rate Constants Using Quantum Chemistry and COSMO-RS Methods
Many industrially and environmentally relevant reactions occur in the liquid phase. An
accurate prediction of the rate constants is needed to analyze the intricate kinetic …
accurate prediction of the rate constants is needed to analyze the intricate kinetic …
Efficient quantum-chemical calculations of acid dissociation constants from free-energy relationships
The calculation of acid dissociation constants (p K a) is an important task in computational
chemistry and chemoinformatics. Theoretically and with minimal empiricism, this is possible …
chemistry and chemoinformatics. Theoretically and with minimal empiricism, this is possible …
[HTML][HTML] COSMO models for the pharmaceutical development of parenteral drug formulations
The aqueous solubility of active pharmaceutical ingredients is one of the most important
features to be considered during the development of parenteral formulations in the …
features to be considered during the development of parenteral formulations in the …
Solvation free energies in subsystem density functional theory
For many chemical processes the accurate description of solvent effects are vitally important.
Here, we describe a hybrid ansatz for the explicit quantum mechanical description of solute …
Here, we describe a hybrid ansatz for the explicit quantum mechanical description of solute …
Impacts of noncovalent interactions involving sulfur atoms on protein stability, structure, folding, and bioactivity
V Kojasoy, DJ Tantillo - Organic & Biomolecular Chemistry, 2023 - pubs.rsc.org
This review discusses the various types of noncovalent interactions in which sulfur atoms
participate and their effects on protein stability, structure, folding and bioactivity. Current …
participate and their effects on protein stability, structure, folding and bioactivity. Current …