Advances in neuroproteomics for neurotrauma: unraveling insights for personalized medicine and future prospects

F Kobeissy, M Goli, H Yadikar, Z Shakkour… - Frontiers in …, 2023 - frontiersin.org
Neuroproteomics, an emerging field at the intersection of neuroscience and proteomics, has
garnered significant attention in the context of neurotrauma research. Neuroproteomics …

A metabolic switch regulates the transition between growth and diapause in C. elegans

S Penkov, BK Raghuraman, C Erkut, J Oertel, R Galli… - BMC biology, 2020 - Springer
Background Metabolic activity alternates between high and low states during different
stages of an organism's life cycle. During the transition from growth to quiescence, a major …

Absolute quantification of photoreceptor outer segment proteins

NP Skiba, TR Lewis, WJ Spencer… - Journal of proteome …, 2023 - ACS Publications
Photoreceptor cells generate neuronal signals in response to capturing light. This process,
called phototransduction, takes place in a highly specialized outer segment organelle. There …

Hybrid QconCAT-based targeted absolute and data-independent acquisition-based label-free quantification enables in-depth proteomic characterization of wheat …

M Sielaff, V Curella, M Neerukonda… - Journal of Proteome …, 2021 - ACS Publications
Wheat amylase/trypsin inhibitors (ATIs) have gained significant relevance as inducers of
intestinal and extra-intestinal inflammation. In this study, we present a novel hybrid data …

Phosphorylation of ACTN4 leads to podocyte vulnerability and proteinuric glomerulosclerosis

D Feng, M Kumar, J Muntel, SB Gurley… - Journal of the …, 2020 - journals.lww.com
Background Genetic mutations in α-actinin-4 (ACTN4)—an important actin crosslinking
cytoskeletal protein that provides structural support for kidney podocytes—have been linked …

Targeted mass-spectrometry-based assays enable multiplex quantification of receptor tyrosine kinase, MAP kinase, and AKT signaling

JR Whiteaker, K Sharma, MA Hoffman, E Kuhn… - Cell reports …, 2021 - cell.com
A primary goal of the US National Cancer Institute's Ras initiative at the Frederick National
Laboratory for Cancer Research is to develop methods to quantify RAS signaling to facilitate …

BAC-DROP: Rapid digestion of proteome fractionated via dissolvable polyacrylamide gel electrophoresis and its application to bottom-up proteomics workflow

A Takemori, J Ishizaki, K Nakashima… - Journal of Proteome …, 2020 - ACS Publications
The GeLC–MS workflow, which combines low-cost, easy-to-use sodium dodecyl sulfate
(SDS)-polyacrylamide gel electrophoresis (SDS-PAGE) with liquid chromatography–mass …

A peptide-centric approach to analyse quantitative proteomics data-an application to prostate cancer biomarker discovery

T Lima, JE Rodrigues, B Manadas, R Henrique… - Journal of …, 2023 - Elsevier
Bottom-up proteomics is a popular approach in molecular biomarker research. However,
protein analysts have realized the limitations of protein-based approaches for identifying …

Assessment of the potential and limitations of elemental mass spectrometry in life sciences for absolute quantification of biomolecules using generic standards

L Cid-Barrio, F Calderón-Celis… - Analytical …, 2020 - ACS Publications
Inductively coupled plasma–mass spectrometry (ICP–MS) has been widely used in Life
Sciences for the absolute quantification of biomolecules without specific standards …

Mobilization of cholesterol induces the transition from quiescence to growth in Caenorhabditis elegans through steroid hormone and mTOR signaling

K Schmeisser, D Kaptan, BK Raghuraman… - Communications …, 2024 - nature.com
Recovery from the quiescent developmental stage called dauer is an essential process in C.
elegans and provides an excellent model to understand how metabolic transitions contribute …