Unveiling invisible protein states with NMR spectroscopy

TR Alderson, LE Kay - Current opinion in structural biology, 2020 - Elsevier
Highlights•Sparsely populated protein states can play significant biological roles.•NMR
spectroscopy can structurally and dynamically characterize 'invisible'protein states.•We …

Lessons from pressure denaturation of proteins

J Roche, CA Royer - Journal of the Royal Society …, 2018 - royalsocietypublishing.org
Although it is now relatively well understood how sequence defines and impacts global
protein stability in specific structural contexts, the question of how sequence modulates the …

Multi‐Site Conformational Exchange in the Synthetic Neomycin‐Sensing Riboswitch Studied by 19F NMR

JH Overbeck, J Vögele, F Nussbaumer… - Angewandte Chemie …, 2023 - Wiley Online Library
The synthetic neomycin‐sensing riboswitch interacts with its cognate ligand neomycin as
well as with the related antibiotics ribostamycin and paromomycin. Binding of these …

Chemical exchange

AG Palmer III, H Koss - Methods in enzymology, 2019 - Elsevier
The phenomenon of chemical or conformational exchange in NMR spectroscopy has
enabled detailed characterization of time-dependent aspects of biomolecular function …

How internal cavities destabilize a protein

M Xue, T Wakamoto, C Kejlberg… - Proceedings of the …, 2019 - National Acad Sciences
Although many proteins possess a distinct folded structure lying at a minimum in a funneled
free energy landscape, thermal energy causes any protein to continuously access lowly …

Protein folding by NMR

A Zhuravleva, DM Korzhnev - Progress in nuclear magnetic resonance …, 2017 - Elsevier
Protein folding is a highly complex process proceeding through a number of disordered and
partially folded nonnative states with various degrees of structural organization. These …

Practical aspects of high-pressure NMR spectroscopy and its applications in protein biophysics and structural biology

JA Caro, AJ Wand - Methods, 2018 - Elsevier
Pressure and temperature are the two fundamental variables of thermodynamics.
Temperature and chemical perturbation are central experimental tools for the exploration of …

[HTML][HTML] Insights into the structure of invisible conformations of large methyl group labeled molecular machines from high pressure NMR

C Krempl, JP Wurm, MB Erlach, W Kremer… - Journal of Molecular …, 2023 - Elsevier
Most proteins are highly flexible and can adopt conformations that deviate from the
energetically most favorable ground state. Structural information on these lowly populated …

Simultaneous determination of fast and slow dynamics in molecules using extreme CPMG relaxation dispersion experiments

JG Reddy, S Pratihar, D Ban, S Frischkorn… - Journal of Biomolecular …, 2018 - Springer
Molecular dynamics play a significant role in how molecules perform their function. A critical
method that provides information on dynamics, at the atomic level, is NMR-based relaxation …

Exploring protein conformational landscapes using high-pressure NMR

J Roche, CA Royer, C Roumestand - Methods in Enzymology, 2019 - Elsevier
Protein conformational landscapes define their functional properties as well as their
proteostasis. Hence, detailed mapping of these landscapes is necessary to understand and …